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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A01
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: A01
Map Start: 0 cM
Map Stop: 133.6 cM
Features by Type:
20 Marker
20 Total

Map Features

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Items 1 to 20 of 20.
Cotton - Guazuncho2xVH8-BC2 - A01
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E5M8_400 Marker 0 Cotton - Guazuncho2xVH8-BC1 - A01 E5M8_400 Marker 40.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 E5M8_400 Marker 102.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 E5M8_400 Marker 29.3 (cM) Automated name-based View Maps
BNL2571 Marker 14.4 Cotton - GVc - 13 BNL2571 Marker 31.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL2571 Marker 99.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL2571 Marker Cotton 54,054,874 - 54,055,401 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL2571b Marker 15.54 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL2571 Marker 25.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 BNL2571 Marker 53.6 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL2571 Marker 23.7 (cM) Automated name-based View Maps
Cotton - CH - 13 BNL2571 Marker 45 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL2571 Marker 34.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c18 BNL2571 Marker 6 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL2571 Marker 95.1 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL2571 Marker 22 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL2571 Marker 67.3 (cM) Automated name-based View Maps
E7M3_249 Marker 36.4 No other positions
E1M5_215 Marker 40.1 Cotton - GVc - 13 E1M5_215 Marker 56.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 E1M5_215 Marker 77.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E1M5_215 Marker 99 (cM) Automated name-based View Maps
E3M4_240 Marker 40.8 No other positions
E4M7_210 Marker 44.2 Cotton - GVc - 13 E4M7_210 Marker 63.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 E4M7_210 Marker 72.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E4M7_210 Marker 105 (cM) Automated name-based View Maps
E5M7_183 Marker 49.6 Cotton - Guazuncho2xVH8-BC1 - A01 E5M7_183 Marker 120.4 (cM) Automated name-based View Maps
Cotton - GVc - 13 E5M7_183 Marker 73.2 (cM) Automated name-based View Maps
Cotton - HDC - 13 E5M7_183 Marker 67.4 (cM) Automated name-based View Maps
E2M5_269 Marker 51.1 No other positions
E2M6_305 Marker 52.3 Cotton - GVc - 13 E2M6_305 Marker 73.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E2M6_305 Marker 120.4 (cM) Automated name-based View Maps
Cotton - HDC - 13 E2M6_305 Marker 68.1 (cM) Automated name-based View Maps
E1M5_260 Marker 65.5 Cotton - Guazuncho2xVH8-BC1 - A01 E1M5_260 Marker 139.9 (cM) Automated name-based View Maps
Cotton - GVc - 13 E1M5_260 Marker 89.5 (cM) Automated name-based View Maps
Cotton - HDC - 13 E1M5_260 Marker 63.1 (cM) Automated name-based View Maps
E3M2_187 Marker 66 Cotton - GVc - 13 E3M2_187 Marker 89.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E3M2_187 Marker 141.2 (cM) Automated name-based View Maps
Cotton - HDC - 13 E3M2_187 Marker 63.2 (cM) Automated name-based View Maps
E6M5_195 Marker 66 Cotton - HDC - 13 E6M5_195 Marker 63.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E6M5_195 Marker 142.3 (cM) Automated name-based View Maps
Cotton - GVc - 13 E6M5_195 Marker 90 (cM) Automated name-based View Maps
E3M6_240 Marker 66.2 Cotton - Guazuncho2xVH8-BC1 - A01 E3M6_240 Marker 142.3 (cM) Automated name-based View Maps
Cotton - GVc - 13 E3M6_240 Marker 88.5 (cM) Automated name-based View Maps
Cotton - HDC - 13 E3M6_240 Marker 63.2 (cM) Automated name-based View Maps
E7M1_186 Marker 66.2 Cotton - GVc - 13 E7M1_186 Marker 91 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E7M1_186 Marker 147 (cM) Automated name-based View Maps
Cotton - HDC - 13 E7M1_186 Marker 61 (cM) Automated name-based View Maps
E7M4_198 Marker 66.3 Cotton - Guazuncho2xVH8-BC1 - A01 E7M4_198 Marker 147 (cM) Automated name-based View Maps
Cotton - HDC - 13 E7M4_198 Marker 59.7 (cM) Automated name-based View Maps
Cotton - GVc - 13 E7M4_198 Marker 92.7 (cM) Automated name-based View Maps
E2M4_114 Marker 69.6 No other positions
E4M3_322 Marker 76.2 Cotton - GVc - 13 E4M3_322 Marker 103.2 (cM) Automated name-based View Maps
Cotton - HDC - 13 E4M3_322 Marker 50.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E4M3_322 Marker 158 (cM) Automated name-based View Maps
E4M6_232 Marker 76.2 Cotton - HDC - 13 E4M6_232 Marker 43.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 E4M6_232 Marker 111.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 E4M6_232 Marker 176 (cM) Automated name-based View Maps
E1M7_450 Marker 92.3 No other positions
E7M4_311 Marker 133.6 No other positions