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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
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Correspondences
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Maps c5
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 181.1 cM
Features by Type:
24 Marker
24 Total

Map Features

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Items 1 to 24 of 24.
Cotton - Guazuncho2xVH8-BC2 - c5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E3M5_298 Marker 0 Cotton - Guazuncho2xVH8-BC1 - c5 E3M5_298 Marker 77.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 E3M5_298 Marker 78.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 E3M5_298 Marker 57.7 (cM) Automated name-based View Maps
BNL3029 Marker 21.1 Cotton - Guazuncho2xVH8-BC2 - D08 BNL3029 Marker 52.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL3029a Marker 21.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL3029 Marker 91.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL3029 Marker 120.3 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL3029 Marker 127.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3029 Marker 59.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3029 Marker 97.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL3029 Marker 103.5 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL3029 Marker 60.77 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3029 Marker 97.7 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL3029 Marker 72.5 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL3029 Marker 69.8 (cM) Automated name-based View Maps
E1M6_205 Marker 48.3 Cotton - HDC - 5 E1M6_205 Marker 96.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 E1M6_205 Marker 37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E1M6_205 Marker 157 (cM) Automated name-based View Maps
BNL2448 Marker 60.5 Cotton - Guazuncho2xVH8-BC1 - D08 BNL2448 Marker 118.5 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL2448 Marker 92.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL2448b Marker 37.63 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL2448 Marker 129.2 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL2448 Marker 156.1 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL2448 Marker 102 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL2448 Marker 167.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL2448 Marker 88 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL2448 Marker 108.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 BNL2448a Marker 43.02 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL2448 Marker 80.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL2448 Marker 47.1 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL2448 Marker 119.9 (cM) Automated name-based View Maps
BNL1878 Marker 64.2 Cotton - Guazuncho2xVH8-BC1 - c5 BNL1878 Marker 170.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL1878 Marker 91.7 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL1878 Marker 112.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL1878 Marker 119.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL1878a Marker 42.72 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL1878 Marker 82 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL1878 Marker 148.1 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL1878 Marker 86.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1878 Marker 85 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL1878 Marker 104.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL1878 Marker 51 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL1878 Marker 103 (cM) Automated name-based View Maps
BNL542 Marker 75.8 Cotton - CH - 5 BNL0542 Marker 105.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL0542 Marker 77.2 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL0542 Marker 120.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL542 Marker 177.4 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL0542 Marker 101.65 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL0542 Marker 58.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL0542 Marker 50.68 (cM) Automated name-based View Maps
BNL4030 Marker 109 Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 57.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 24.8 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 124.9 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL4030 Marker 25.9 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 77.5 (cM) Automated name-based View Maps
E6M8_237 Marker 110.8 No other positions
E3M8_328 Marker 126.2 No other positions
E3M5_136 Marker 130.5 No other positions
E5M5_151 Marker 131.8 Cotton - HDC - 5 E5M5_151 Marker 45.2 (cM) Automated name-based View Maps
Cotton - GVc - 5 E5M5_151 Marker 96.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E5M5_151 Marker 258.5 (cM) Automated name-based View Maps
E2M1_125 Marker 132.1 No other positions
E5M1_156 Marker 132.8 Cotton - HDC - 5 E5M1_156 Marker 45 (cM) Automated name-based View Maps
Cotton - GVc - 5 E5M1_156 Marker 96.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E5M1_156 Marker 258.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 E5M1_156 Marker 96.9 (cM) Automated name-based View Maps
E3M5_142 Marker 132.8 Cotton - HDC - 5 E3M5_142 Marker 45.7 (cM) Automated name-based View Maps
Cotton - GVc - 5 E3M5_142 Marker 95.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E3M5_142 Marker 258.5 (cM) Automated name-based View Maps
E5M1_148 Marker 137 Cotton - Guazuncho2xVH8-BC1 - c5 E5M1_148 Marker 261 (cM) Automated name-based View Maps
Cotton - HDC - 5 E5M1_148 Marker 42.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 E5M1_148 Marker 99.8 (cM) Automated name-based View Maps
E6M6_430 Marker 149.2 No other positions
E3M1_225 Marker 163 Cotton - Guazuncho2xVH8-BC1 - c5 E3M1_225 Marker 211.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 E3M1_225 Marker 59.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 E3M1_225 Marker 79.1 (cM) Automated name-based View Maps
E4M6_170 Marker 165.7 No other positions
E5M6_303 Marker 166.8 Cotton - GVc - 5 E5M6_303 Marker 90.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E5M6_303 Marker 253.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 E5M6_303 Marker 50.1 (cM) Automated name-based View Maps
E7M5_161 Marker 166.8 Cotton - GVc - 5 E7M5_161 Marker 86.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 E7M5_161 Marker 53.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E7M5_161 Marker 251.8 (cM) Automated name-based View Maps
E6M7_315 Marker 167.5 No other positions
E7M1_176 Marker 171.3 No other positions
E3M2_268 Marker 171.3 Cotton - HDC - 5 E3M2_268 Marker 56 (cM) Automated name-based View Maps
Cotton - GVc - 5 E3M2_268 Marker 83.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E3M2_268 Marker 251.8 (cM) Automated name-based View Maps
E5M5_190 Marker 181.1 Cotton - HDC - 5 E5M5_190 Marker 54.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 E5M5_190 Marker 247.6 (cM) Automated name-based View Maps
Cotton - GVc - 5 E5M5_190 Marker 84.8 (cM) Automated name-based View Maps