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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
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Maps c6
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: c6
Map Start: 0 cM
Map Stop: 108.7 cM
Features by Type:
26 Marker
26 Total

Map Features

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Items 1 to 25 of 26.       of 2 | Next
Cotton - Guazuncho2xVH8-BC2 - c6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3359 Marker 0 Cotton - Guazuncho2xVH8-BC1 - c25 BNL3359 Marker 11.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3359 Marker 8.6 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3359 Marker 12.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3359a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3359 Marker 11.1 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL3359 Marker 135 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL3359 Marker Cotton 813,375 - 814,071 (bp) Automated name-based View Maps
Cotton - HDC - 6 BNL3359 Marker 147.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3359 Marker 125.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL3359b Marker 12.41 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL3359 Marker 5.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL3359 Marker 137.2 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3359 Marker 129.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL3359 Marker 1.1 (cM) Automated name-based View Maps
E7M1_102 Marker 37.2 Cotton - HDC - 6 E7M1_102 Marker 113.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E7M1_102 Marker 103.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 E7M1_102 Marker 37.2 (cM) Automated name-based View Maps
E2M1_375 Marker 42.4 No other positions
BNL1440 Marker 43.9 Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1440 Marker 83.8 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1440 Marker 83.6 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1440 Marker 101.4 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
E3M2_124 Marker 52.7 No other positions
E2M3_127 Marker 54.3 No other positions
E6M6_137 Marker 56.4 Cotton - Guazuncho2xVH8-BC1 - c6 E6M6_137 Marker 142.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 E6M6_137 Marker 86 (cM) Automated name-based View Maps
Cotton - GVc - 6 E6M6_137 Marker 65.3 (cM) Automated name-based View Maps
E2M5_182 Marker 56.9 Cotton - HDC - 6 E2M5_182 Marker 88.5 (cM) Automated name-based View Maps
Cotton - GVc - 6 E2M5_182 Marker 63.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E2M5_182 Marker 138.6 (cM) Automated name-based View Maps
E7M5_280 Marker 57.7 Cotton - Guazuncho2xVH8-BC1 - c6 E7M5_280 Marker 141.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 E7M5_280 Marker 92.1 (cM) Automated name-based View Maps
Cotton - GVc - 6 E7M5_280 Marker 58.8 (cM) Automated name-based View Maps
E7M5_370 Marker 57.7 Cotton - GVc - 6 E7M5_370 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E7M5_370 Marker 141.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 E7M5_370 Marker 90.2 (cM) Automated name-based View Maps
E3M4_410 Marker 57.7 Cotton - GVc - 6 E3M4_410 Marker 61.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E3M4_410 Marker 141.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 E3M4_410 Marker 90.1 (cM) Automated name-based View Maps
E2M6_360 Marker 58.8 Cotton - HDC - 6 E2M6_360 Marker 92.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 E2M6_360 Marker 58.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E2M6_360 Marker 142.3 (cM) Automated name-based View Maps
E4M3_420 Marker 59.5 No other positions
E7M1_278 Marker 59.5 No other positions
E4M5_205 Marker 60.2 No other positions
E7M5_340 Marker 60.2 Cotton - HDC - 6 E7M5_340 Marker 89.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E7M5_340 Marker 142.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 E7M5_340 Marker 62 (cM) Automated name-based View Maps
E6M3_240 Marker 60.2 Cotton - HDC - 6 E6M3_240 Marker 89 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E6M3_240 Marker 143.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 E6M3_240 Marker 62.9 (cM) Automated name-based View Maps
E7M7_194 Marker 60.2 No other positions
E5M6_268 Marker 60.4 No other positions
E5M8_128 Marker 60.4 Cotton - Guazuncho2xVH8-BC1 - c6 E5M8_128 Marker 148 (cM) Automated name-based View Maps
Cotton - HDC - 6 E5M8_128 Marker 88.7 (cM) Automated name-based View Maps
Cotton - GVc - 6 E5M8_128 Marker 63.5 (cM) Automated name-based View Maps
E6M8_85 Marker 60.8 Cotton - GVc - 6 E6M8_85 Marker 65 (cM) Automated name-based View Maps
Cotton - HDC - 6 E6M8_85 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E6M8_85 Marker 149.3 (cM) Automated name-based View Maps
E5M7_160 Marker 60.8 Cotton - GVc - 6 E5M7_160 Marker 69.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 E5M7_160 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E5M7_160 Marker 151 (cM) Automated name-based View Maps
E6M5_145 Marker 63.4 Cotton - GVc - 6 E6M5_145 Marker 60.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 E6M5_145 Marker 154.9 (cM) Automated name-based View Maps
Cotton - HDC - 6 E6M5_145 Marker 90.3 (cM) Automated name-based View Maps
BNL2884 Marker 80.1 Cotton - HDC - 6 BNL2884 Marker 70.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL2884 Marker Cotton 57,271,338 - 57,271,690 (bp) Automated name-based View Maps
Cotton - CH - 6 BNL2884 Marker 117.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2884 Marker 78.9 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL2884 Marker 41.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL2884 Marker 198.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL2884 Marker 35.92 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL2884 Marker 113.2 (cM) Automated name-based View Maps
E2M7_126 Marker 99.6 Cotton - Guazuncho2xVH8-BC1 - c6 E2M7_126 Marker 264.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 E2M7_126 Marker 44.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 E2M7_126 Marker 105.8 (cM) Automated name-based View Maps