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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
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Maps c5
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 108.92 cM
Features by Type:
43 Marker
2 QTL
45 Total

Map Features

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Items 1 to 25 of 45.       of 2 | Next
Cotton - Guazuncho2xVH8-RIL - c5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E36M47-M158.5 Marker 79.89 No other positions
CIR301 Marker 76.97 Cotton - GVc - 5 CIR301 Marker 91.7 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR301 Marker 125.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR301 Marker Cotton 11,541,386 - 11,541,818 (bp) Automated name-based View Maps
Cotton - E3 - 5 CIR301 Marker 189.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR301 Marker 253.1 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR301 Marker 83.5 (cM) Automated name-based View Maps
E32M49-M517.0 Marker 75.81 No other positions
E32M50-M186.8 Marker 75.62 No other positions
E43M53-M308.6 Marker 75.57 Cotton - GVc - 5 E43M53-M308.6 Marker 91 (cM) Automated name-based View Maps
NAU1223 Marker 15.12 Cotton - Guazuncho2xVH8-BC1 - c5 NAU1223 Marker 80.9 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1223 Marker 54.4 (cM) Automated name-based View Maps
NAU1137 Marker 0.31 Cotton - CH - 5 NAU1137 Marker 224.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU1137 Marker 22.5 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1137 Marker 0.6 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU1137 Marker 29.1 (cM) Automated name-based View Maps
CIR224a Marker 0 Cotton - GVc - 19 CIR224 Marker 13.5 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR224 Marker 67.69 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR224 Marker 43.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR224 Marker Cotton 332,369 - 332,555 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR224 Marker 22.8 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR224 Marker 27.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR224 Marker 5.54 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 CIR224b Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR224 Marker 22.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR224c Marker 39.49 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 CIR224 Marker 17.3 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR224 Marker 7.28 (cM) Automated name-based View Maps
Cotton - CH - 19 CIR224 Marker 131.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR224 Marker 50.1 (cM) Automated name-based View Maps
Gate3BG11 Marker 8.61 Cotton - PK - A03 Gate3BG11 Marker 145.9 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate3BG11 Marker 17.8 (cM) Automated name-based View Maps
E31M61-M61.4 Marker 14.77 No other positions
BNL4071a Marker 17.65 Cotton - Graimondii_physical - Gr_Chr09 BNL4071 Marker Cotton 7,131,232 - 7,131,564 (bp) Automated name-based View Maps
Cotton - E3 - 19 BNL4071 Marker 69.3 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL4071 Marker 43.34 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL4071 Marker 44.66 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4071 Marker 184.2 (cM) Automated name-based View Maps
BNL3029a Marker 21.68 Cotton - TH - 19 BNL3029 Marker 69.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3029 Marker 59.68 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL3029 Marker 60.77 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL3029 Marker 52.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL3029 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3029 Marker 97.3 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3029 Marker 97.7 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL3029 Marker 127.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL3029 Marker 91.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL3029 Marker 21.1 (cM) Automated name-based View Maps
NAU2029 Marker 23.44 Cotton - GVc - 5 NAU2029 Marker 25.6 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU2029 Marker 87.2 (cM) Automated name-based View Maps
NAU1042a Marker 25.1 Cotton - T3 - 19 NAU1042 Marker 63.45 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1042 Marker 115.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 NAU1042 Marker 92.5 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1042 Marker 68.3 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU1042 Marker 51.59 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 128.2 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 129 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 NAU1042b Marker 35.84 (cM) Automated name-based View Maps
Cotton - GVc - 19 NAU1042 Marker 75.6 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 56.4 (cM) Automated name-based View Maps
CIR062a Marker 30.57 Cotton - GVc - 19 CIR062 Marker 97.7 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR062 Marker 77.05 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 CIR062b Marker 37.94 (cM) Automated name-based View Maps
Cotton - TH - 19 CIR062 Marker 91.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR062 Marker 157 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR062 Marker 93.8 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR062 Marker 89.93 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR062 Marker 35.5 (cM) Automated name-based View Maps
CIR034 Marker 35.64 Cotton - Guazuncho2xVH8-BC1 - c5 CIR034 Marker 165.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR034 Marker 44 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR034 Marker 118.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR034 Marker Cotton 21,568,801 - 21,568,960 (bp) Automated name-based View Maps
Cotton - T3 - 5 CIR034 Marker 89.85 (cM) Automated name-based View Maps
BNL2448b Marker 37.63 Cotton - CH - 5 BNL2448 Marker 119.9 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL2448 Marker 102 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL2448 Marker 167.7 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL2448 Marker 108.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 BNL2448a Marker 43.02 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL2448 Marker 118.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL2448 Marker 60.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL2448 Marker 47.1 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL2448 Marker 129.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL2448 Marker 80.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL2448 Marker 156.1 (cM) Automated name-based View Maps
E32M54-M245.0 Marker 39.97 No other positions
BNL1878a Marker 42.72 Cotton - CH - 19 BNL1878 Marker 86.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL1878 Marker 51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL1878 Marker 170.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL1878 Marker 119.7 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL1878 Marker 103 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL1878 Marker 104.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL1878 Marker 64.2 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL1878 Marker 112.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL1878 Marker 82 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL1878 Marker 148.1 (cM) Automated name-based View Maps
E36M47-M87.9 Marker 49.08 No other positions
BNL0542 Marker 50.68 Cotton - Guazuncho2xVH8-BC2 - c5 BNL542 Marker 75.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL0542 Marker 101.65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL542 Marker 177.4 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL0542 Marker 120.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0542 Marker Cotton 24,289,365 - 24,289,705 (bp) Automated name-based View Maps
Cotton - GVc - 5 BNL0542 Marker 58.7 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL0542 Marker 105.3 (cM) Automated name-based View Maps
JESPR241 Marker 55.06 Cotton - CH - 5 JESPR241 Marker 98.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR241 Marker 64.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR241 Marker 105.25 (cM) Automated name-based View Maps
JESPR204c Marker 57.34 Cotton - GVc - 19 JESPR204 Marker 124.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 JESPR204 Marker 163.4 (cM) Automated name-based View Maps
Cotton - TH - 19 JESPR204 Marker 116.6 (cM) Automated name-based View Maps
Cotton - TH - 13 JESPR204 Marker 31.3 (cM) Automated name-based View Maps
Cotton - T3 - 18 JESPR204 Marker 81.68 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR204 Marker 65.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 JESPR204 Marker 25.3 (cM) Automated name-based View Maps
Cotton - E3 - 19 JESPR204 Marker 167 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 JESPR204 Marker 185.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 JESPR204 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 JESPR204b Marker 15.74 (cM) Automated name-based View Maps
Cotton - TH - 18 JESPR204 Marker 38.3 (cM) Automated name-based View Maps
Cotton - T3 - 19 JESPR204 Marker 113 (cM) Automated name-based View Maps
Cotton - CH - 18 JESPR204 Marker 43.6 (cM) Automated name-based View Maps
E43M49-M260.0 Marker 58.71 No other positions
E43M48-M68.3 Marker 59.23 No other positions