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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-MQ7653_Raboin_2006
(Reference Set)
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Correspondences
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Maps group87
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - MQ7653_Raboin_2006 [ View Map Set Info ]
Map Name: group87
Map Start: 0 cM
Map Stop: 110.3 cM
Features by Type:
15 Marker
15 Total

Map Features

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Items 1 to 15 of 15.
Sugarcane - MQ7653_Raboin_2006 - group87
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
aagcag7 Marker 74.4 No other positions
aagcag19 Marker 21.4 No other positions
acacta1 Marker 105.3 Sugarcane - R570AF_Rossi_2003 - VI1b acacta1 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group33 acacta1 Marker 0 (cM) Automated name-based View Maps
acactg13 Marker 9.9 Sugarcane - R570AF_Hoarau_2001 - group28 acactg13 Marker 24 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - VI2 acactg13 Marker 75.3 (cM) Automated name-based View Maps
acactt8 Marker 50.1 Sugarcane - R570_Raboin_2006 - group130 acactt8 Marker 0 (cM) Automated name-based View Maps
accctg1 Marker 58.3 No other positions
accctt8 Marker 41.1 No other positions
actcac1 Marker 110.3 Sugarcane - R570AF_Rossi_2003 - VIII1 actcac1 Marker 169.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group14 actcac1 Marker 110.9 (cM) Automated name-based View Maps
actcag12 Marker 58.8 Sugarcane - R570AF_Rossi_2003 - U12 actcag12 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group53 actcag12 Marker 0 (cM) Automated name-based View Maps
actcat14 Marker 18.3 Sugarcane - R570AF_Rossi_2003 - U15 actcat14 Marker 31.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group91 actcat14 Marker 14.3 (cM) Automated name-based View Maps
actctt19 Marker 53.6 Sugarcane - R570AF_Rossi_2003 - III10 actctt19 Marker 8.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group114 actctt19 Marker 3 (cM) Automated name-based View Maps
agccta11 Marker 18.8 No other positions
aggcat8 Marker 88.3 Sugarcane - R570_Raboin_2006 - group69 aggcat8 Marker 8.8 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group4 aggcat8 Marker 136.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - II9 aggcat8 Marker 38.3 (cM) Automated name-based View Maps
aggcta9 Marker 25.7 Sugarcane - R570AF_Rossi_2003 - U6 aggcta9 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group137 aggcta9 Marker 10 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group42 aggcta9 Marker 0 (cM) Automated name-based View Maps
mSSESTA06m10 Marker 0 Sugarcane - R570_Raboin_2006 - group106 mSSESTA06m2 Marker 7.4 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group150 mSSESTA06m7 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group50 mSSESTA06m8 Marker 108.4 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group81 mSSESTA06m4 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group98 mSSESTA06m11 Marker 0 (cM) Automated name-based View Maps