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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Physical_map_IBM2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Maize - Physical_map_IBM2 [ View Map Set Info ]
Map Name: 1
Map Start: 0 bp
Map Stop: 300.55 bp
Features by Type:
249 Marker
249 Total

Map Features

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Items 1 to 25 of 249.       of 10 | Next
Maize - Physical_map_IBM2 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B663B Marker 213.28 Rice - Synthethic_map - 8 B663B Marker 21.09 (bp) Automated name-based, Automated name-based View Maps
bnlg1811 Marker 70.81 No other positions
umc1446 Marker 240.78 No other positions
umc1461 Marker 122.14 No other positions
B343B Marker 266.98 Rice - Synthethic_map - 3 B343B Marker 28.57 (bp) Automated name-based, Automated name-based View Maps
B210E Marker 178.45 Rice - Synthethic_map - 12 B210E Marker 27.09 - 27.1 (bp) Automated name-based, Automated name-based View Maps
B297B Marker 25.38 Rice - Synthethic_map - 3 B297B Marker 4.79 - 4.8 (bp) Automated name-based, Automated name-based View Maps
bnl6.32 Marker 297.96 No other positions
B324B Marker 222.36 - 222.38 Rice - Synthethic_map - 3 B324B Marker 20.24 (bp) Automated name-based, Automated name-based View Maps
B113B Marker 91.26 Rice - Synthethic_map - 10 B113B Marker 21.86 (bp) Automated name-based, Automated name-based View Maps
B200E Marker 255.21 Rice - Synthethic_map - 12 B200E Marker 24.22 (bp) Automated name-based, Automated name-based View Maps
umc1906 Marker 162.59 No other positions
bnlg1014 Marker 6.95 No other positions
B352B Marker 292.16 Rice - Synthethic_map - 3 B352B Marker 34.17 (bp) Automated name-based, Automated name-based View Maps
umc1396 Marker 191.09 No other positions
B301E Marker 52.25 Rice - Synthethic_map - 3 B301E Marker 11.57 (bp) Automated name-based, Automated name-based View Maps
umc1605 Marker 298.69 No other positions
B661E Marker 213.96 - 213.97 Rice - Synthethic_map - 8 B661E Marker 21.24 (bp) Automated name-based, Automated name-based View Maps
B318B Marker 72.71 Rice - Synthethic_map - 3 B318B Marker 17.09 (bp) Automated name-based, Automated name-based View Maps
B093B Marker 242.45 Rice - Synthethic_map - 10 B093B Marker 14.23 (bp) Automated name-based, Automated name-based View Maps
B087B Marker 130.75 - 130.76 Rice - Synthethic_map - 10 B087B Marker 10.84 (bp) Automated name-based, Automated name-based View Maps
B343E Marker 277.09 Rice - Synthethic_map - 3 B343E Marker 31.02 (bp) Automated name-based, Automated name-based View Maps
B210B Marker 179.37 Rice - Synthethic_map - 12 B210B Marker 27.02 (bp) Automated name-based, Automated name-based View Maps
B298E Marker 28.93 Rice - Synthethic_map - 3 B298E Marker 6.61 (bp) Automated name-based, Automated name-based View Maps
umc1128 Marker 224.27 No other positions