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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570AF_Rossi_2003
(Reference Set)
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Correspondences
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Maps I4
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570AF_Rossi_2003 [ View Map Set Info ]
Map Name: I4
Map Start: 0 cM
Map Stop: 113.7 cM
Features by Type:
15 Marker
15 Total

Map Features

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Items 1 to 15 of 15.
Sugarcane - R570AF_Rossi_2003 - I4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mSSCIR53m2 Marker 113.7 Sugarcane - R570_Raboin_2006 - group43 mSSCIR53m2 Marker 18.2 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group42 mSSCIR53m1 Marker 27 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group96 mSSCIR53m11 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group28 mSSCIR53m10 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I10 mSSCIR53m1 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I7 mSSCIR53m9 Marker 130 (cM) Automated name-based View Maps
R083Sste Marker 88 No other positions
aagcaa29 Marker 65 Sugarcane - R570AF_Hoarau_2001 - group1 aagcaa29 Marker 0 (cM) Automated name-based View Maps
mSSCIR42m7 Marker 48.7 Sugarcane - R570AF_Rossi_2003 - U54 mSSCIR42m1 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - III3 mSSCIR42m4 Marker 37.7 (cM) Automated name-based View Maps
accctg9 Marker 37.6 Sugarcane - R570_Raboin_2006 - group43 accctg9 Marker 54.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group1 accctg9 Marker 8.6 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group20 accctg9 Marker 9.8 (cM) Automated name-based View Maps
mSSCIR19m1 Marker 30.2 Sugarcane - R570_Raboin_2006 - group40 mSSCIR19m5 Marker 67.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I7 mSSCIR19m5 Marker 96.5 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group42 mSSCIR19m2 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group43 mSSCIR19m1 Marker 45.8 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group44 mSSCIR19m1 Marker 7 (cM) Automated name-based View Maps
agcctc11 Marker 26.3 Sugarcane - R570AF_Hoarau_2001 - group1 agcctc11 Marker 12.7 (cM) Automated name-based View Maps
aagctc14 Marker 24.4 Sugarcane - MQ7653_Raboin_2006 - group76 aagctc14 Marker 27.2 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group1 aagctc14 Marker 15.2 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group43 aagctc14 Marker 48.7 (cM) Automated name-based View Maps
aaccac12 Marker 16.2 Sugarcane - R570AF_Hoarau_2001 - group1 aaccac12 Marker 24.1 (cM) Automated name-based View Maps
aaccac10 Marker 6.7 Sugarcane - R570AF_Hoarau_2001 - group1 aaccac10 Marker 32.9 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group79 aaccac10 Marker 45.1 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group43 aaccac10 Marker 68.8 (cM) Automated name-based View Maps
agcctc8 Marker 5.7 Sugarcane - R570AF_Hoarau_2001 - group1 agcctc8 Marker 35.1 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group79 agcctc8 Marker 32.1 (cM) Automated name-based View Maps
aagcag17 Marker 5.7 Sugarcane - R570AF_Hoarau_2001 - group1 aagcag17 Marker 37.7 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group94 aagcag17 Marker 13.9 (cM) Automated name-based View Maps
acactg15 Marker 4.8 Sugarcane - R570_Raboin_2006 - group43 acactg15 Marker 73.2 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group85 acactg15 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group1 acactg15 Marker 39.2 (cM) Automated name-based View Maps
mSSCIR52m3 Marker 2.9 Sugarcane - R570AF_Rossi_2003 - I8 mSSCIR52m1 Marker 7.1 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group114 mSSCIR52m2 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group43 mSSCIR52m3 Marker 78.7 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group54 mSSCIR52m8 Marker 86.2 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group77 mSSCIR52m10 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - Ia mSSCIR52m8 Marker 5.1 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group187 mSSCIR52m9 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group44 mSSCIR52m12 Marker 39.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I6 mSSCIR52m6 Marker 20.3 (cM) Automated name-based View Maps
R125Ssta Marker 0 No other positions