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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570AF_Rossi_2003
(Reference Set)
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Correspondences
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Maps VII1a
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570AF_Rossi_2003 [ View Map Set Info ]
Map Name: VII1a
Map Start: 0 cM
Map Stop: 59.2 cM
Features by Type:
13 Marker
13 Total

Map Features

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Items 1 to 13 of 13.
Sugarcane - R570AF_Rossi_2003 - VII1a
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Bru1 Marker 30.7 No other positions
acgcag6 Marker 59.2 Sugarcane - R570_Raboin_2006 - group146 acgcag6 Marker 43.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group60 acgcag6 Marker 29.5 (cM) Automated name-based View Maps
acgctt17 Marker 36 Sugarcane - R570AF_Hoarau_2001 - group60 acgctt17 Marker 15.7 (cM) Automated name-based View Maps
aagcta23 Marker 33 Sugarcane - R570AF_Hoarau_2001 - group60 aagcta23 Marker 13.3 (cM) Automated name-based View Maps
aaccgt Marker 32.9 No other positions
CDSR29 Marker 32.9 Sugarcane - R570AF_Asnaghi_2000 - VII11 CDSR29 Marker 2.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Asnaghi_2000 - VII16 CDSR29 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Asnaghi_2000 - VII2 CDSR29 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Asnaghi_2000 - VII1 CDSR29 Marker 6.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Asnaghi_2000 - VII3 CDSR29 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Asnaghi_2000 - VII13 CDSR29 Marker 2.2 (cM) Automated name-based View Maps
actctg9r Marker 32.9 Sugarcane - R570_Raboin_2006 - group146 actctg9R Marker 44.4 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group60 actctg9R Marker 11.8 (cM) Automated name-based View Maps
attcag Marker 28.8 No other positions
aaccac6 Marker 28.2 Sugarcane - R570AF_Hoarau_2001 - group60 aaccac6 Marker 6.2 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group146 aaccac6 Marker 54 (cM) Automated name-based View Maps
actctt22 Marker 27.2 Sugarcane - MQ7653_Raboin_2006 - group157 actctt22 Marker 21.3 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group60 actctt22 Marker 3.7 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group146 actctt22 Marker 75.7 (cM) Automated name-based View Maps
aagctt19 Marker 25.6 Sugarcane - R570AF_Hoarau_2001 - group60 aagctt19 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group146 aagctt19 Marker 30.6 (cM) Automated name-based View Maps
R137Sstd Marker 25.5 No other positions
mSSCIR4m5 Marker 0 Sugarcane - MQ7653_Raboin_2006 - group177 mSSCIR4m10 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group58 mSSCIR4m6 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - VIIa mSSCIR4m4 Marker 11.6 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group95 mSSCIR4m9 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group181 mSSCIR4m2 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - VII9 mSSCIR4m8 Marker 0 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - VII14 mSSCIR4m3 Marker 0 (cM) Automated name-based View Maps