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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sugarcane-R570_Raboin_2006
(Reference Set)
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Correspondences
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Maps group40
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sugarcane - R570_Raboin_2006 [ View Map Set Info ]
Map Name: group40
Map Start: 0 cM
Map Stop: 90.4 cM
Features by Type:
13 Marker
13 Total

Map Features

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Items 1 to 13 of 13.
Sugarcane - R570_Raboin_2006 - group40
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mSSCIR19m5 Marker 67.1 Sugarcane - R570_Raboin_2006 - group43 mSSCIR19m1 Marker 45.8 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I7 mSSCIR19m5 Marker 96.5 (cM) Automated name-based View Maps
Sugarcane - R570_Raboin_2006 - group42 mSSCIR19m2 Marker 0 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group44 mSSCIR19m1 Marker 7 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I4 mSSCIR19m1 Marker 30.2 (cM) Automated name-based View Maps
agcctc7 Marker 90.4 Sugarcane - R570AF_Rossi_2003 - I7 agcctc7 Marker 51.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 agcctc7 Marker 45 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group15 agcctc7 Marker 77.9 (cM) Automated name-based View Maps
agccta6 Marker 36.8 Sugarcane - R570AF_Rossi_2003 - I7 agccta6 Marker 188.1 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group118 agccta6 Marker 10.5 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 agccta6 Marker 139.2 (cM) Automated name-based View Maps
agccat28 Marker 40.7 Sugarcane - R570AF_Hoarau_2001 - group74 agccat28 Marker 122.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I7 agccat28 Marker 164.9 (cM) Automated name-based View Maps
actctt13 Marker 33.1 Sugarcane - R570AF_Rossi_2003 - I7 actctt13 Marker 195.5 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group34 actctt13 Marker 6.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 actctt13 Marker 147.1 (cM) Automated name-based View Maps
actcagx3 Marker 5.2 No other positions
acgcta24 Marker 0 Sugarcane - R570AF_Rossi_2003 - I7 acgcta24 Marker 232.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 acgcta24 Marker 180.2 (cM) Automated name-based View Maps
accctg18 Marker 81.8 Sugarcane - R570AF_Rossi_2003 - I7 accctg18 Marker 41.6 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 accctg18 Marker 35.8 (cM) Automated name-based View Maps
acccat5 Marker 36.3 Sugarcane - MQ7653_Raboin_2006 - group34 acccat5 Marker 6.1 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 acccat5 Marker 140.7 (cM) Automated name-based View Maps
Sugarcane - R570AF_Rossi_2003 - I7 acccat5 Marker 189.1 (cM) Automated name-based View Maps
acacaa19 Marker 86.1 No other positions
acacaa7 Marker 15.3 Sugarcane - R570AF_Rossi_2003 - I7 acacaa7 Marker 226.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 acacaa7 Marker 174.7 (cM) Automated name-based View Maps
aagctcx5 Marker 88.2 No other positions
aagctc11 Marker 86.6 Sugarcane - R570AF_Rossi_2003 - I7 aagctc11 Marker 50.4 (cM) Automated name-based View Maps
Sugarcane - MQ7653_Raboin_2006 - group78 aagctc11 Marker 24.9 (cM) Automated name-based View Maps
Sugarcane - R570AF_Hoarau_2001 - group74 aagctc11 Marker 43.8 (cM) Automated name-based View Maps