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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Coconut-RIT2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Coconut - RIT2 [ View Map Set Info ]
Map Name: LG5
Map Start: 0 cM
Map Stop: 58.6 cM
Features by Type:
10 Marker
7 QTL
17 Total

Map Features

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Items 1 to 17 of 17.
Coconut - RIT2 - LG5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CnCir H11 Marker 47.9 No other positions
CnCir 167 Marker 26.4 No other positions
61/3 (EGAA/MTTA) Marker 0 No other positions
69/2 (PAA/MACA) Marker 3.3 No other positions
72/1 (EACA/PCC) Marker 34.2 No other positions
Eg5/EcoR1 Marker 35.7 Coconut - RIT2 - LG15 Eg5/EcoR1 Marker 69.9 (cM) Automated name-based View Maps
EgCIR3750 Marker 41.8 No other positions
Eg6/Sst1 Marker 41.8 No other positions
CNZ03 Marker 47.9 No other positions
88/1 (EGAG/MTTA) Marker 58.6 No other positions
Q%Ub QTL 34.2 No other positions
Q%Wc QTL 42 No other positions
QWc QTL 42.2 No other positions
Q%Mb QTL 43.6 No other positions
QFd QTL 44.3 No other positions
QSe QTL 45.1 No other positions
QHa QTL 46.7 No other positions