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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 12
Map Start: 0 bp
Map Stop: 27.53 bp
Features by Type:
130 Marker
25 QTL
155 Total

Map Features

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Items 1 to 25 of 154.       of 7 | Next
Rice - Synthethic_map - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B202B Marker 24.46 - 24.462 Maize - Physical_map_IBM2 - 1 B202B Marker 255.14 - 255.15 (bp) Automated name-based, Automated name-based View Maps
TEL12S Marker 0 No other positions
B168B Marker 0.097 - 0.1 Maize - Physical_map_IBM2 - 2 B168B Marker 154.25 - 154.26 (bp) Automated name-based, Automated name-based View Maps
B183E Marker 7.477 - 7.48 Maize - Physical_map_IBM2 - 10 B183E Marker 38.92 - 38.93 (bp) Automated name-based, Automated name-based View Maps
B194B Marker 22.43 - 22.432 Maize - Physical_map_IBM2 - 10 B194B Marker 23.22 (bp) Automated name-based, Automated name-based View Maps
B208E Marker 27.06 - 27.061 Maize - Physical_map_IBM2 - 1 B208E Marker 178.5 (bp) Automated name-based, Automated name-based View Maps
RZ261 Marker 21.197 No other positions
B176B Marker 2.709 - 2.713 Maize - Physical_map_IBM2 - 10 B176B Marker 5.76 - 5.77 (bp) Automated name-based, Automated name-based View Maps
B201E Marker 24.873 - 24.877 Maize - Physical_map_IBM2 - 1 B201E Marker 165.42 - 165.43 (bp) Automated name-based, Automated name-based View Maps
RM20A Marker 0.97 No other positions
B167E Marker 0.555 - 0.558 Maize - Physical_map_IBM2 - 3 B167E Marker 229.68 (bp) Automated name-based, Automated name-based View Maps
B184E Marker 17.613 - 17.618 Maize - Physical_map_IBM2 - 10 B184E Marker 13.65 (bp) Automated name-based, Automated name-based View Maps
B194E Marker 22.617 - 22.622 Maize - Physical_map_IBM2 - 10 B194E Marker 22.13 - 22.14 (bp) Automated name-based, Automated name-based View Maps
B210E Marker 27.095 - 27.099 Maize - Physical_map_IBM2 - 1 B210E Marker 178.45 (bp) Automated name-based, Automated name-based View Maps
CDO459 Marker 23.373 No other positions
B177E Marker 3.967 - 3.971 Maize - Physical_map_IBM2 - 3 B177E Marker 139.7 (bp) Automated name-based, Automated name-based View Maps
B204B Marker 24.916 - 24.917 Maize - Physical_map_IBM2 - 1 B204B Marker 166.08 (bp) Automated name-based, Automated name-based View Maps
RM247 Marker 3.185 No other positions
B170B Marker 0.784 - 0.788 Maize - Physical_map_IBM2 - 2 B170B Marker 152.62 - 152.67 (bp) Automated name-based, Automated name-based View Maps
B185E Marker 19.181 - 19.185 Maize - Physical_map_IBM2 - 10 B185E Marker 16.58 (bp) Automated name-based, Automated name-based View Maps
B196B Marker 22.949 - 22.951 Maize - Physical_map_IBM2 - 3 B196B Marker 129.11 (bp) Automated name-based, Automated name-based View Maps
B213B Marker 27.123 - 27.126 Maize - Physical_map_IBM2 - 3 B213B Marker 92.28 (bp) Automated name-based, Automated name-based View Maps
RG543 Marker 23.775 No other positions
B178B Marker 4.413 - 4.416 Maize - Physical_map_IBM2 - 10 B178B Marker 15.92 (bp) Automated name-based, Automated name-based View Maps
B205B Marker 25.236 - 25.24 Maize - Physical_map_IBM2 - 1 B205B Marker 170 - 170.01 (bp) Automated name-based, Automated name-based View Maps