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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 8
Map Start: 0 bp
Map Stop: 28.44 bp
Features by Type:
173 Marker
38 QTL
211 Total

Map Features

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Items 1 to 25 of 210.       of 9 | Next
Rice - Synthethic_map - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B664B Marker 21.307 - 21.309 Maize - Physical_map_IBM2 - 4 B664B Marker 85.32 (bp) Automated name-based, Automated name-based View Maps
AC5 Marker 25.484 No other positions
B680B Marker 27.404 - 27.406 Maize - Physical_map_IBM2 - 1 B680B Marker 207.66 (bp) Automated name-based, Automated name-based View Maps
B632B Marker 3.367 - 3.373 Maize - Physical_map_IBM2 - 10 B632B Marker 78.33 - 78.34 (bp) Automated name-based, Automated name-based View Maps
B646E Marker 8.874 - 8.879 Maize - Physical_map_IBM2 - 4 B646E Marker 71.94 - 71.95 (bp) Automated name-based, Automated name-based View Maps
S2104 Marker 0.151 No other positions
A18434 Marker 12.875 No other positions
B672E Marker 25.498 - 25.502 Maize - Physical_map_IBM2 - 4 B672E Marker 200.21 (bp) Automated name-based, Automated name-based View Maps
B624B Marker 1.525 - 1.529 Maize - Physical_map_IBM2 - 4 B624B Marker 36.91 - 36.92 (bp) Automated name-based, Automated name-based View Maps
B640E Marker 5.229 - 5.23 Maize - Physical_map_IBM2 - 4 B640E Marker 28.74 - 28.75 (bp) Automated name-based, Automated name-based View Maps
B656E Marker 19.216 - 19.217 Maize - Physical_map_IBM2 - 4 B656E Marker 75.04 - 75.05 (bp) Automated name-based, Automated name-based View Maps
B665B Marker 21.537 - 21.541 Maize - Physical_map_IBM2 - 4 B665B Marker 60.04 - 60.05 (bp) Automated name-based, Automated name-based View Maps
RZ926A Marker 25.484 No other positions
B679E Marker 27.619 - 27.622 Maize - Physical_map_IBM2 - 4 B679E Marker 217.97 - 217.98 (bp) Automated name-based, Automated name-based View Maps
B632E Marker 3.744 - 3.745 Maize - Physical_map_IBM2 - 10 B632E Marker 75.16 (bp) Automated name-based, Automated name-based View Maps
B648E Marker 9.225 - 9.228 Maize - Physical_map_IBM2 - 10 B648E Marker 53.49 (bp) Automated name-based, Automated name-based View Maps
P0498H04 Marker 0.599 No other positions
RZ323 Marker 13.928 No other positions
B673B Marker 25.61 - 25.616 Maize - Physical_map_IBM2 - 1 B673B Marker 191.71 (bp) Automated name-based, Automated name-based View Maps
B625E Marker 1.589 - 1.59 Maize - Physical_map_IBM2 - 6 B625E Marker 7.16 (bp) Automated name-based, Automated name-based View Maps
B641E Marker 5.433 - 5.434 Maize - Physical_map_IBM2 - 4 B641E Marker 27.48 (bp) Automated name-based, Automated name-based View Maps
B657B Marker 19.383 - 19.386 Maize - Physical_map_IBM2 - 4 B657B Marker 75.53 (bp) Automated name-based, Automated name-based View Maps
B666B Marker 22.353 - 22.355 Maize - Physical_map_IBM2 - 4 B666B Marker 62.89 (bp) Automated name-based, Automated name-based View Maps
RG136 Marker 27.108 No other positions
B682B Marker 27.849 - 27.856 Maize - Physical_map_IBM2 - 4 B682B Marker 54.12 - 54.13 (bp) Automated name-based, Automated name-based View Maps