CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 20
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 20
Map Start: 0 cM
Map Stop: 113.3 cM
Features by Type:
95 Marker
95 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 95.       of 4 | Next
Cotton - TH - 20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU3574 Marker 60.3 Cotton - TH - 10 NAU3574 Marker 55.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3574 Marker 163.4 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU3574 Marker 114.6 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3956 Marker 82 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU3574 Marker 91.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3956 Marker 97.4 (cM) Automated name-based View Maps
NAU2915 Marker 60.7 Cotton - HDC - 20 NAU2915 Marker 81.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2915 Marker Cotton 42,328,790 - 42,329,666 (bp) Automated name-based View Maps
JESPR056 Marker 61.4 Cotton - E3 - 1 JESPR056 Marker 33.6 (cM) Automated name-based View Maps
Cotton - HDC - 3 JESPR056 Marker 98.6 (cM) Automated name-based View Maps
Cotton - TH - 10 JESPR056 Marker 55.3 (cM) Automated name-based View Maps
Cotton - GVc - 10 JESPR056 Marker 51.2 (cM) Automated name-based View Maps
Cotton - HDC - 20 JESPR056 Marker 81.4 (cM) Automated name-based View Maps
Cotton - HDC - 18 JESPR056 Marker 70.5 (cM) Automated name-based View Maps
Cotton - HDC - 1 JESPR056 Marker 65.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 JESPR056 Marker 97.7 (cM) Automated name-based View Maps
Cotton - E3 - 10 JESPR056 Marker 119.9 (cM) Automated name-based View Maps
Cotton - TH - 18 JESPR056 Marker 56.9 (cM) Automated name-based View Maps
Cotton - TH - 1 JESPR056 Marker 62.2 (cM) Automated name-based View Maps
Cotton - T3 - 3 JESPR056 Marker 84.92 (cM) Automated name-based View Maps
Cotton - T3 - 1 JESPR056 Marker 60 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 JESPR056 Marker 59.1 (cM) Automated name-based View Maps
Cotton - T3 - 18 JESPR056 Marker 60.48 (cM) Automated name-based View Maps
CIR094 Marker 62.1 Cotton - GVc - 20 CIR094 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR094a Marker 9.96 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR094 Marker 29.2 (cM) Automated name-based View Maps
Cotton - TH - 1 CIR094 Marker 76.3 (cM) Automated name-based View Maps
Cotton - HDC - 1 CIR094 Marker 54.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR094 Marker Cotton 2,039,966 - 2,040,166 (bp) Automated name-based View Maps
Cotton - HDC - 20 CIR094 Marker 140.4 (cM) Automated name-based View Maps
NAU6260 Marker 62.8 Cotton - HDC - 20 NAU6260 Marker 80.5 (cM) Automated name-based View Maps
NAU6269 Marker 63.1 Cotton - E3 - 20 NAU6269 Marker 87 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU6269 Marker 73.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU6269 Marker 104.2 (cM) Automated name-based View Maps
Cotton - E3 - 25 NAU6269 Marker 55.7 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6269 Marker 80.4 (cM) Automated name-based View Maps
NAU3813 Marker 64 Cotton - E3 - 20 NAU3813 Marker 84 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU2198 Marker 44.6 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU2198 Marker 79.8 (cM) Automated name-based View Maps
NAU6219 Marker 64.1 Cotton - HDC - 20 NAU6219 Marker 79.8 (cM) Automated name-based View Maps
NAU6515 Marker 64.5 Cotton - HDC - 20 NAU6515 Marker 79.5 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU6515 Marker 65.3 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU6515 Marker 68.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6515 Marker 72.7 (cM) Automated name-based View Maps
NAU3404 Marker 64.8 Cotton - E3 - 20 NAU3404 Marker 80.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU1225 Marker 79.4 (cM) Automated name-based View Maps
NAU3665 Marker 65 Cotton - E3 - 10 NAU3665 Marker 70.9 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU3665 Marker 79.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU3665 Marker 79.3 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3665 Marker 66.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3665 Marker 70.4 (cM) Automated name-based View Maps
NAU1297 Marker 65.3 Cotton - T3 - 20 NAU1297 Marker 75.37 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU203 Marker 73.2 (cM) Automated name-based View Maps
NAU6476 Marker 65.6 Cotton - HDC - 20 NAU6476 Marker 78.9 (cM) Automated name-based View Maps
NAU6215 Marker 65.7 Cotton - E3 - 10 NAU6215 Marker 69 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6215 Marker 78.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6215 Marker 68.8 (cM) Automated name-based View Maps
NAU6667 Marker 65.8 Cotton - TH - 10 NAU6667 Marker 65.5 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU6667 Marker 79.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6667 Marker 72.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6667 Marker 78.8 (cM) Automated name-based View Maps
TMF09-200 Marker 66.3 Cotton - HDC - 20 TMF09-200 Marker 78.5 (cM) Automated name-based View Maps
NAU2869 Marker 66.8 Cotton - E3 - 10 NAU2869 Marker 64.6 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU2869 Marker 68.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2869 Marker Cotton 49,752,380 - 49,753,299 (bp) Automated name-based View Maps
Cotton - HDC - 10 NAU2869 Marker 65.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU2869 Marker 78.2 (cM) Automated name-based View Maps
TML05-280 Marker 67.7 Cotton - HDC - 20 TML05-280 Marker 77.7 (cM) Automated name-based View Maps
NAU2182 Marker 68.8 Cotton - TH - 1 NAU2182 Marker 65.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3854 Marker 77 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU2182 Marker 33.5 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU3854 Marker 64.3 (cM) Automated name-based View Maps
BNL0119 Marker 69.7 Cotton - GVc - 20 BNL0119 Marker 124.5 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL0119 Marker 72.52 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL0119 Marker 76.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL119 Marker 206.4 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL0119 Marker 35.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL0119 Marker Cotton 50,619,343 - 50,619,691 (bp) Automated name-based View Maps
Cotton - E3 - 20 BNL0119 Marker 80.1 (cM) Automated name-based View Maps
BNL0169 Marker 71.8 Cotton - Graimondii_physical - Gr_Chr11 BNL0169 Marker Cotton 52,767,986 - 52,768,276 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL0169 Marker 67.21 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL169 Marker 191.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL169 Marker 95.5 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL0169 Marker 108.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL0169 Marker 70.8 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL0169 Marker 77.49 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL0169 Marker 77.1 (cM) Automated name-based View Maps
NAU3368 Marker 72.8 Cotton - E3 - 20 NAU3368 Marker 73.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU3368 Marker 69.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU3368 Marker Cotton 53,245,925 - 53,246,524 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU3368 Marker 39 (cM) Automated name-based View Maps
NAU0922 Marker 74.1 Cotton - TH - 5 NAU0922 Marker 63.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU922 Marker 92 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU0922 Marker 67.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU0922 Marker 74.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU0922 Marker 104.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 NAU0922 Marker 18.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU0922 Marker Cotton 10,824,213 - 10,825,057 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 NAU922 Marker 235 (cM) Automated name-based View Maps
Cotton - GVc - 11 NAU0922 Marker 227.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU0922 Marker 56.18 (cM) Automated name-based View Maps
NAU6495 Marker 76.8 Cotton - E3 - 20 NAU6495 Marker 69 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6495 Marker 64.4 (cM) Automated name-based View Maps
NAU6360 Marker 76.8 Cotton - HDC - 20 NAU6360 Marker 64.4 (cM) Automated name-based View Maps