CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c20
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c20
Map Start: 0 cM
Map Stop: 146 cM
Features by Type:
93 Marker
12 QTL
105 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 105.       of 5 | Next
Cotton - PK - c20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig23B04 Marker 35.3 Cotton - Graimondii_physical - Gr_Chr11 Unig23B04 Marker Cotton 3,160,865 - 3,161,523 (bp) Automated name-based View Maps
Cotton - HDC - 20 Unig23B04 Marker 130.7 (cM) Automated name-based View Maps
Unig23E04 Marker 137.7 Cotton - HDC - 20 Unig23E04 Marker 29.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig23E04 Marker Cotton 61,557,845 - 61,558,346 (bp) Automated name-based View Maps
Unig24E01 Marker 77.6 Cotton - Graimondii_physical - Gr_Chr11 Unig24E01 Marker Cotton 20,201,759 - 20,202,429 (bp) Automated name-based View Maps
Cotton - HDC - 20 Unig24E01 Marker 86.2 (cM) Automated name-based View Maps
Unig26D08 Marker 35.3 Cotton - HDC - 10 Unig26D08 Marker 142.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig26D08 Marker Cotton 3,066,975 - 3,067,578 (bp) Automated name-based View Maps
Cotton - HDC - 20 Unig26D08 Marker 130.7 (cM) Automated name-based View Maps
Cotton - PK - c10 Unig26D08 Marker 34.8 (cM) Automated name-based View Maps
W03 Marker 69.4 Cotton - Graimondii_physical - Gr_Chr11 W03 Marker Cotton 17,045,914 - 17,046,324 (bp) Automated name-based View Maps
Cotton - HDC - 20 W03 Marker 96 (cM) Automated name-based View Maps
A1131 Marker 77.6 Cotton - HDC - 20 A1131 Marker 86.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 A1131 Marker Cotton 20,581,320 - 20,582,326 (bp) Automated name-based View Maps
A1163 Marker 44 Cotton - HDC - 10 A1163 Marker 132.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 A1163 Marker 8.5 (cM) Automated name-based View Maps
Cotton - PK - c10 A1163 Marker 49.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 A1163 Marker Cotton 4,047,503 - 4,049,287 (bp) Automated name-based View Maps
Cotton - GVc - 10 A1163 Marker 9.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 A1163 Marker 124.4 (cM) Automated name-based View Maps
A1217 Marker 110.2 Cotton - HDC - 20 CLU1 Marker 50.2 (cM) Automated name-based View Maps
Cotton - GVc - 20 A1217 Marker 130 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 A1217 Marker 230.9 (cM) Automated name-based View Maps
A1461 Marker 55.7 Cotton - Graimondii_physical - Gr_Chr11 A1461 Marker Cotton 7,088,450 - 7,089,426 (bp) Automated name-based View Maps
Cotton - HDC - 20 A1461 Marker 112.3 (cM) Automated name-based View Maps
A1682 Marker 70.4 Cotton - HDC - 20 A1682 Marker 94.8 (cM) Automated name-based View Maps
A1758 Marker 10.4 Cotton - HDC - 20 A1758 Marker 148.5 (cM) Automated name-based View Maps
BNL2553 Marker 145.9 Cotton - GVc - 20 BNL2553 Marker 159.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL2553 Marker 97.76 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL2553 Marker 113.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL2553 Marker 264.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL2553 Marker 23.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL2553 Marker Cotton 62,003,659 - 62,004,132 (bp) Automated name-based View Maps
Cotton - E3 - 20 BNL2553 Marker 25.5 (cM) Automated name-based View Maps
BNL3482 Marker 22.3 Cotton - CH - 26 BNL3482 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3482 Marker 82.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 BNL3482a Marker 33.83 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3482 Marker 140.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL3482 Marker 96.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3482 Marker 28 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL3482 Marker 74.3 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3482 Marker 46.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3482b Marker 9.44 (cM) Automated name-based View Maps
Coau1F04 Marker 115.3 Cotton - HDC - 20 Coau1F04 Marker 46.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Coau1F04 Marker Cotton 56,352,569 - 56,353,235 (bp) Automated name-based View Maps
Coau2I04 Marker 126.8 Cotton - HDC - 20 Coau2I04 Marker 37.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Coau2I04 Marker Cotton 56,984,213 - 56,984,838 (bp) Automated name-based View Maps
G1104 Marker 137.7 Cotton - HDC - 20 G1104 Marker 29.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 G1104 Marker Cotton 61,341,126 - 61,341,538 (bp) Automated name-based View Maps
G1218 Marker 110.6 Cotton - Graimondii_physical - Gr_Chr11 G1218 Marker Cotton 53,133,403 - 53,134,140 (bp) Automated name-based View Maps
Cotton - HDC - 20 G1218 Marker 49.9 (cM) Automated name-based View Maps
G1261 Marker 89.2 Cotton - PK - c16 G1261 Marker 75.3 (cM) Automated name-based View Maps
Cotton - PK - D02 G1261 Marker 141.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 G1261 Marker Cotton 52,965,148 - 52,966,293 (bp) Automated name-based View Maps
Cotton - HDC - 16 G1261 Marker 69 (cM) Automated name-based View Maps
Cotton - HDC - 26 G1261 Marker 108.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 G1261 Marker 76.2 (cM) Automated name-based View Maps
Cotton - PK - c26 G1261 Marker 49.6 (cM) Automated name-based View Maps
Cotton - HDC - 21 G1261 Marker 82 (cM) Automated name-based View Maps
Gate1AB02 Marker 53.1 Cotton - HDC - 20 Gate1AB02 Marker 115.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate1AB02 Marker Cotton 6,784,338 - 6,784,805 (bp) Automated name-based View Maps
Gate1BH09 Marker 91 Cotton - HDC - 20 Gate1BH09 Marker 46.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate1BH09 Marker 74.3 (cM) Automated name-based View Maps
Cotton - PK - A02 Gate1BH09 Marker 117.9 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gate1BH09 Marker 126.2 (cM) Automated name-based View Maps
Gate1CA06 Marker 94.6 Cotton - HDC - 20 Gate1CA06 Marker 70.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate1CA06 Marker Cotton 49,856,427 - 49,857,273 (bp) Automated name-based View Maps
Gate1DG04 Marker 21.8 Cotton - HDC - 7 Gate1DG04 Marker 39.9 (cM) Automated name-based View Maps
Cotton - PK - c7 Gate1DG04 Marker 63.7 (cM) Automated name-based View Maps
Cotton - PK - c14 Gate1DG04 Marker 138.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate1DG04 Marker 140.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate1DG04 Marker 22.4 (cM) Automated name-based View Maps
Gate2AF06 Marker 29.2 Cotton - HDC - 20 Gate2AF06 Marker 135.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate2AF06 Marker 142.5 (cM) Automated name-based View Maps
Cotton - PK - c10 Gate2AF06 Marker 34.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate2AF06 Marker 138.1 (cM) Automated name-based View Maps
Gate2DF07 Marker 63.1 Cotton - Graimondii_physical - Gr_Chr06 Gate2DF07 Marker Cotton 43,309,253 - 43,309,938 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate2DF07 Marker 103.5 (cM) Automated name-based View Maps
Gate3BD01 Marker 118.1 Cotton - Graimondii_physical - Gr_Chr11 Gate3BD01 Marker Cotton 56,374,486 - 56,375,191 (bp) Automated name-based View Maps
Cotton - PK - c15 Gate3BD01 Marker 25.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 Gate3BD01 Marker 33.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate3BD01 Marker 44.3 (cM) Automated name-based View Maps