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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 7
Map Start: 0 bp
Map Stop: 29,696,629 bp
Features by Type:
252 Marker Oryza
177 QTL
429 Total

Map Features

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Items 1 to 25 of 429.       of 18 | Next
Rice - Synthetic_map1 - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM182 Marker Oryza 21,504,348 - 21,504,688 No other positions
E61009S Marker Oryza 23,600,342 - 23,603,093 No other positions
RM629 Marker Oryza 25,651,877 - 25,652,022 No other positions
R10148S Marker Oryza 1,318,052 - 1,318,367 No other positions
C1023 Marker Oryza 7,232,314 - 7,232,998 No other positions
S14082S Marker Oryza 236,040 - 236,446 No other positions
R430 Marker Oryza 16,521,697 - 16,522,952 No other positions
C62085S Marker Oryza 13,606,727 - 13,607,045 No other positions
S2279 Marker Oryza 23,513,490 - 23,514,085 No other positions
RG517 Marker Oryza 23,106,761 - 23,107,148 No other positions
E1160S Marker Oryza 10,178,121 - 10,178,815 No other positions
RM432 Marker Oryza 18,958,597 - 18,958,782 No other positions
L831 Marker Oryza 29,171,742 - 29,172,000 No other positions
RZ96 Marker Oryza 13,743,992 - 13,744,357 No other positions
R2394 Marker Oryza 22,857,717 - 22,858,329 No other positions
C39 Marker Oryza 11,360,643 - 11,361,086 No other positions
C728 Marker Oryza 29,583,057 - 29,584,741 No other positions
RM2 Marker Oryza 16,021,683 - 16,021,833 No other positions
EAAM17_5 Marker Oryza 1,160,982 - 1,161,434 No other positions
RM82 Marker Oryza 3,127,201 - 3,127,377 No other positions
R1233 Marker Oryza 15,420,865 - 15,422,118 No other positions
C1057 Marker Oryza 2,633,784 - 2,634,193 No other positions
S14165 Marker Oryza 26,707,393 - 26,710,703 No other positions
R565B Marker Oryza 3,328,552 - 3,328,927 No other positions
S4774 Marker Oryza 4,738,002 - 4,740,350 No other positions