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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cocoa-SSR_SNP_consensus_map
(Reference Set)
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Maps LG9
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:
No Yes
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Sanity Check:
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - SSR_SNP_consensus_map [ View Map Set Info ]
Map Name: LG9
Map Start: 0 cM
Map Stop: 100.9 cM
Features by Type:
182 Marker
182 Total

Map Features

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Items 26 to 50 of 182.       Previous | of 8 | Next
Cocoa - SSR_SNP_consensus_map - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TcSNP1080 Marker 86.9 Cocoa - Physical map - Tc09 TcSNP1080 Marker 27,312,740 - 27,315,034 (bp) Automated name-based View Maps
TcSNP1253 Marker 20.2 Cocoa - Physical map - Tc09 TcSNP1253 Marker 3,857,865 - 3,859,606 (bp) Automated name-based View Maps
TcSNP740 Marker 68.8 Cocoa - Physical map - Tc09 TcSNP740 Marker 24,415,464 - 24,416,296 (bp) Automated name-based View Maps
mTcCIR297 Marker 12.7 Cocoa - Physical map - Tc09 mTcCIR297 Marker 2,472,959 - 2,473,690 (bp) Automated name-based View Maps
TcSNP1163 Marker 60.7 Cocoa - Physical map - Tc09 TcSNP1163 Marker 22,665,375 - 22,666,774 (bp) Automated name-based View Maps
TcSNP1368 Marker 30.9 Cocoa - Physical map - Tc09 TcSNP1368 Marker 6,472,274 - 6,473,440 (bp) Automated name-based View Maps
mTcCIR63 Marker 48.4 Cocoa - test - LG9 mTcCIR63 Marker 49.8 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR63 Marker 49.8 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR63 Marker 49.8 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR63 Marker 15,625,611 - 15,626,377 (bp) Automated name-based View Maps
TcSNP793 Marker 68.4 Cocoa - Physical map - Tc09 TcSNP793 Marker 24,667,567 - 24,669,861 (bp) Automated name-based View Maps
TcSNP1439 Marker 78.1 Cocoa - Physical map - Tc09 TcSNP1439 Marker 26,369,331 - 26,369,963 (bp) Automated name-based View Maps
mTcCIR266 Marker 6.6 Cocoa - consensus_disease_res - LG9 mTcCIR266 Marker 10.5 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR266 Marker 10.5 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR266 Marker 87.7 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR266 Marker 1,251,594 - 1,252,030 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR266 Marker 10.5 (cM) Automated name-based View Maps
mTcCIR491 Marker 50.4 Cocoa - Physical map - Tc09 mTcCIR491 Marker 13,161,911 - 13,163,933 (bp) Automated name-based View Maps
mTcCIR160 Marker 41.6 Cocoa - consensus_disease_res - LG9 mTcCIR160 Marker 43.5 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR160 Marker 43.5 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR160 Marker 10,596,965 - 10,597,342 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR160 Marker 43.5 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR160 Marker 55.6 (cM) Automated name-based View Maps
C106 Marker 85.2 Cocoa - Physical map - Tc09 C106 Marker 27,099,446 - 27,099,652 (bp) Automated name-based View Maps
Cocoa - test - LG9 C106 Marker 86.1 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 C106 Marker 86.1 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 C106 Marker 86.1 (cM) Automated name-based View Maps
TcSNP1221 Marker 12.2 Cocoa - Physical map - Tc09 TcSNP1221 Marker 2,515,503 - 2,516,074 (bp) Automated name-based View Maps
TcSNP321 Marker 18.8 Cocoa - Physical map - Tc09 TcSNP321 Marker 3,642,910 - 3,643,832 (bp) Automated name-based View Maps
TcSNP764 Marker 60.5 Cocoa - Physical map - Tc09 TcSNP764 Marker 21,912,794 - 21,915,034 (bp) Automated name-based View Maps
mTcCIR90 Marker 48.4 Cocoa - ref_UPA402xUF676 - LG9 mTcCIR90 Marker 50.4 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR90 Marker 50.4 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR90 Marker 50.4 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR90 Marker 15,255,897 - 15,256,592 (bp) Automated name-based View Maps
mTcCIR305 Marker 30.2 Cocoa - Physical map - Tc09 mTcCIR305 Marker 6,186,983 - 6,188,447 (bp) Automated name-based View Maps
TcSNP368 Marker 77.1 Cocoa - Physical map - Tc09 TcSNP368 Marker 25,824,978 - 25,825,533 (bp) Automated name-based View Maps
TcSNP242 Marker 67.5 Cocoa - Physical map - Tc09 TcSNP242 Marker 23,898,064 - 23,898,426 (bp) Automated name-based View Maps
gTcCIR109 Marker 5.5 Cocoa - ref_UPA402xUF676 - LG9 gTcCIR109 Marker 9 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG9 gTcCIR109 Marker 0 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 gTcCIR109 Marker 9 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 gTcCIR109 Marker 1,089,593 - 1,089,854 (bp) Automated name-based View Maps
Cocoa - test - LG9 gTcCIR109 Marker 9 (cM) Automated name-based View Maps
mTcCIR577 Marker 49.7 Cocoa - Physical map - Tc09 mTcCIR577 Marker 18,276,579 - 18,278,615 (bp) Automated name-based View Maps
TcSNP264 Marker 40.5 Cocoa - Physical map - Tc09 TcSNP264 Marker 9,865,332 - 9,867,176 (bp) Automated name-based View Maps
TcSNP480 Marker 83 Cocoa - Physical map - Tc09 TcSNP480 Marker 26,791,126 - 26,791,852 (bp) Automated name-based View Maps
mTcCIR306 Marker 17.7 Cocoa - Physical map - Tc09 mTcCIR306 Marker 3,734,516 - 3,736,228 (bp) Automated name-based View Maps