CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 11
Map Start: 0 cM
Map Stop: 239.2 cM
Features by Type:
126 Marker
126 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 126.       of 6 | Next
Cotton - E3 - 11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU2877 Marker 85.1 Cotton - HDC - 21 NAU2877 Marker 133 (cM) Automated name-based View Maps
Cotton - TH - 21 NAU2877 Marker 68.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 NAU2877 Marker 148.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 NAU2877 Marker Cotton 43,776,810 - 43,777,670 (bp) Automated name-based View Maps
NAU3377 Marker 233.1 Cotton - E3 - 21 NAU3377 Marker 251.6 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU3377 Marker 164.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 NAU3377 Marker Cotton 379,994 - 380,755 (bp) Automated name-based View Maps
Cotton - HDC - 11 NAU3377 Marker 22.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 NAU3377 Marker 9.1 (cM) Automated name-based View Maps
Cotton - TH - 21 NAU3377 Marker 174.2 (cM) Automated name-based View Maps
BNL3592 Marker 84.4 Cotton - Guazuncho2xVH8-RIL - c11 BNL3592 Marker 27.02 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL3592 Marker 112.41 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL3592 Marker 149.6 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL3592 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL3592 Marker 86.7 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3592 Marker 73.4 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL3592 Marker 126.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL3592 Marker Cotton 43,820,900 - 43,821,383 (bp) Automated name-based View Maps
DPL0715 Marker 229.7 Cotton - T3 - 11 DPL0715 Marker 6.05 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 DPL0715 Marker Cotton 366,906 - 367,472 (bp) Automated name-based View Maps
Cotton - HDC - 11 DPL0715 Marker 19.8 (cM) Automated name-based View Maps
BNL1408 Marker 84.1 Cotton - Graimondii_physical - Gr_Chr07 BNL1408 Marker Cotton 43,869,393 - 43,869,806 (bp) Automated name-based View Maps
Cotton - T3 - 11 BNL1408 Marker 111.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1408 Marker 134.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1408 Marker 148.8 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL1408 Marker 73.6 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL1408 Marker 71.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL1408 Marker 86.7 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL1408 Marker 67.4 (cM) Automated name-based View Maps
MUSS281 Marker 228.5 Cotton - HDC - 11 CLU3359 Marker 16.8 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSS281 Marker 3 (cM) Automated name-based View Maps
DPL0338 Marker 81.6 Cotton - Graimondii_physical - Gr_Chr07 DPL0338 Marker Cotton 44,836,440 - 44,837,227 (bp) Automated name-based View Maps
Cotton - T3 - 11 DPL0338 Marker 111.74 (cM) Automated name-based View Maps
Cotton - HDC - 11 DPL0338 Marker 149.1 (cM) Automated name-based View Maps
HAU3249 Marker 226.9 Cotton - HDC - 11 CLU1886 Marker 22.7 (cM) Automated name-based View Maps
TMB1667 Marker 81.3 Cotton - HDC - 11 TMB1667 Marker 150 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 TMB1667 Marker Cotton 37,637,279 - 37,637,781 (bp) Automated name-based View Maps
TMB1980 Marker 225.2 Cotton - T3 - 11 TMB1980 Marker 5.92 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU186 Marker 19.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU186 Marker 19.9 (cM) Automated name-based View Maps
BNL1595 Marker 80.9 Cotton - CH - 11 BNL1595 Marker 125.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1595 Marker 151.1 (cM) Automated name-based View Maps
NAU3008 Marker 224.8 Cotton - HDC - 11 CLU3885 Marker 19.9 (cM) Automated name-based View Maps
MUSB0827 Marker 80.4 Cotton - T3 - 11 MUSB0827 Marker 115.37 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB0827 Marker Cotton 37,406,029 - 37,406,886 (bp) Automated name-based View Maps
Cotton - HDC - 11 MUSB0827 Marker 152.5 (cM) Automated name-based View Maps
NAU5461 Marker 221.4 Cotton - HDC - 11 CLU1944 Marker 13.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU1944 Marker 12.2 (cM) Automated name-based View Maps
Cotton - TH - 21 NAU5461 Marker 170.8 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU5461 Marker 159.4 (cM) Automated name-based View Maps
DPL0325 Marker 76.5 Cotton - T3 - 11 DPL0325 Marker 116.37 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU182 Marker 153.5 (cM) Automated name-based View Maps
MUSS123 Marker 221.1 Cotton - T3 - 11 MUSS123 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU1944 Marker 12.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU1944 Marker 13.8 (cM) Automated name-based View Maps
NAU2809 Marker 71.4 Cotton - Graimondii_physical - Gr_Chr07 NAU2809 Marker Cotton 48,012,384 - 48,013,210 (bp) Automated name-based View Maps
Cotton - HDC - 11 NAU2809 Marker 155 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU2809 Marker 68.3 (cM) Automated name-based View Maps
HAU3356 Marker 220.5 Cotton - HDC - 11 CLU1944 Marker 13.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU1944 Marker 12.2 (cM) Automated name-based View Maps
NAU4086 Marker 70.2 Cotton - TH - 11 NAU4086 Marker 67.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU4246 Marker 156.8 (cM) Automated name-based View Maps
NAU3621 Marker 218 Cotton - HDC - 11 NAU3621 Marker 28.1 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU3621 Marker 156.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 NAU3621 Marker Cotton 2,084,025 - 2,084,924 (bp) Automated name-based View Maps
NAU3115 Marker 69.7 Cotton - Graimondii_physical - Gr_Chr07 NAU3115 Marker Cotton 49,442,190 - 49,442,856 (bp) Automated name-based View Maps
Cotton - HDC - 11 NAU3115 Marker 156 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU3115 Marker 67.8 (cM) Automated name-based View Maps
MUCS557 Marker 216.8 Cotton - T3 - 11 MUCS557 Marker 13.48 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 MUCS557 Marker 61.13 (cM) Automated name-based View Maps
Cotton - CH - 11 MUCS557 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU2964 Marker 27.3 (cM) Automated name-based View Maps
Cotton - CH - 11 MUCS557 Marker 3.2 (cM) Automated name-based View Maps
DPL0270 Marker 68 Cotton - T3 - 11 DPL0270 Marker 125.94 (cM) Automated name-based View Maps
Cotton - HDC - 11 DPL0270 Marker 162.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 DPL0270 Marker Cotton 50,681,564 - 50,682,218 (bp) Automated name-based View Maps
STV176 Marker 216.2 Cotton - HDC - 11 CLU5390 Marker 28.3 (cM) Automated name-based View Maps
JESPR296 Marker 67.1 Cotton - TH - 11 JESPR296 Marker 63 (cM) Automated name-based View Maps
Cotton - HDC - 11 JESPR296 Marker 162.3 (cM) Automated name-based View Maps
Cotton - CH - 11 JESPR296 Marker 137.3 (cM) Automated name-based View Maps