CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 21
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 21
Map Start: 0 cM
Map Stop: 136.78 cM
Features by Type:
80 Marker
80 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 80.       of 4 | Next
Cotton - T3 - 21
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU2016 Marker 120.7 Cotton - E3 - 11 NAU2016 Marker 23 (cM) Automated name-based View Maps
Cotton - TH - 11 NAU2016 Marker 18.1 (cM) Automated name-based View Maps
Cotton - E3 - 21 NAU2016 Marker 40.3 (cM) Automated name-based View Maps
Cotton - T3 - 11 NAU2016 Marker 146.95 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU2046 Marker 191.4 (cM) Automated name-based View Maps
Cotton - TH - 21 NAU2016 Marker 15.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU2046 Marker 151.9 (cM) Automated name-based View Maps
CIR196 Marker 120.72 Cotton - Guazuncho2xVH8-RIL - c11 CIR196 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 11 CIR196 Marker 190.2 (cM) Automated name-based View Maps
Cotton - GVc - 11 CIR196 Marker 30 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 CIR196 Marker 23.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR196 Marker 151.8 (cM) Automated name-based View Maps
Cotton - T3 - 11 CIR196 Marker 145.83 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CIR196 Marker Cotton 58,205,773 - 58,206,128 (bp) Automated name-based View Maps
MUCS088 Marker 122.64 Cotton - HDC - 21 CLU1920 Marker 153.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU1920 Marker 189.1 (cM) Automated name-based View Maps
Cotton - E3 - 11 MUCS088 Marker 24.1 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUCS088 Marker 144.96 (cM) Automated name-based View Maps
CIR316 Marker 128 Cotton - Guazuncho2xVH8-BC1 - D02 CIR316 Marker 15.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR316 Marker 159 (cM) Automated name-based View Maps
Cotton - HDC - 11 CIR316 Marker 200.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CIR316 Marker Cotton 59,563,157 - 59,563,440 (bp) Automated name-based View Maps
Cotton - GVc - 21 CIR316 Marker 14.9 (cM) Automated name-based View Maps
Cotton - T3 - 11 CIR316 Marker 155.98 (cM) Automated name-based View Maps
DPL0475 Marker 129.13 Cotton - Graimondii_physical - Gr_Chr07 DPL0475 Marker Cotton 59,146,364 - 59,146,932 (bp) Automated name-based View Maps
Cotton - E3 - 21 DPL0475 Marker 29.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 DPL0475 Marker 160.1 (cM) Automated name-based View Maps
TMB0879 Marker 132.27 Cotton - HDC - 21 TMB0879 Marker 163.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 TMB0879 Marker Cotton 43,404,080 - 43,404,702 (bp) Automated name-based View Maps
BNL2681 Marker 133.71 Cotton - HDC - 9 BNL2681 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL2681 Marker 235.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL2681 Marker 164.7 (cM) Automated name-based View Maps
DPL0376 Marker 136.78 Cotton - Graimondii_physical - Gr_Chr07 DPL0376 Marker Cotton 60,442,144 - 60,442,795 (bp) Automated name-based View Maps
Cotton - HDC - 21 DPL0376 Marker 167.8 (cM) Automated name-based View Maps
MUSS532 Marker 0 Cotton - Graimondii_physical - Gr_Chr07 MUSS532 Marker Cotton 1,639,591 - 1,640,381 (bp) Automated name-based View Maps
Cotton - TH - 21 MUSS532 Marker 167.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 MUSS532 Marker 15.5 (cM) Automated name-based View Maps
Cotton - E3 - 21 MUSS532 Marker 233.8 (cM) Automated name-based View Maps
DPL0193 Marker 9.27 Cotton - Graimondii_physical - Gr_Chr07 DPL0193 Marker Cotton 285,701 - 286,309 (bp) Automated name-based View Maps
Cotton - HDC - 21 DPL0193 Marker 24.8 (cM) Automated name-based View Maps
TMB1402 Marker 10.34 Cotton - HDC - 21 TMB1402 Marker 25.8 (cM) Automated name-based View Maps
DPL0717 Marker 13.45 Cotton - HDC - 21 CLU189 Marker 29 (cM) Automated name-based View Maps
BNL1705 Marker 19.25 Cotton - GVc - 21 BNL1705 Marker 190 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL1705 Marker 292.9 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1705 Marker 34.7 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL1705 Marker 164.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL1705 Marker Cotton 2,190,066 - 2,190,553 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1705 Marker 167.19 (cM) Automated name-based View Maps
TMB1493 Marker 20.57 Cotton - Graimondii_physical - Gr_Chr07 TMB1493 Marker Cotton 2,177,801 - 2,178,256 (bp) Automated name-based View Maps
Cotton - HDC - 21 TMB1493 Marker 37.1 (cM) Automated name-based View Maps
Cotton - E3 - 21 TMB1493 Marker 230.8 (cM) Automated name-based View Maps
Gh301 Marker 26.67 Cotton - HDC - 21 Gh301 Marker 47.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Gh301 Marker Cotton 2,594,789 - 2,595,413 (bp) Automated name-based View Maps
CIR156 Marker 32.41 Cotton - GVc - 21 CIR156 Marker 159.6 (cM) Automated name-based View Maps
Cotton - TH - 21 CIR156 Marker 153.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CIR156 Marker Cotton 3,411,986 - 3,412,316 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 CIR156 Marker 260.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR156 Marker 57.9 (cM) Automated name-based View Maps
MUSB1197 Marker 34.09 Cotton - HDC - 21 MUSB1197 Marker 60.4 (cM) Automated name-based View Maps
Cotton - E3 - 21 MUSB1197 Marker 214.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 MUSB1197 Marker 146.37 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 MUSB1197 Marker Cotton 3,764,378 - 3,764,818 (bp) Automated name-based View Maps
CIR013 Marker 35.42 Cotton - Graimondii_physical - Gr_Chr07 CIR013 Marker Cotton 4,108,349 - 4,108,614 (bp) Automated name-based View Maps
Cotton - CH - 21 CIR013 Marker 14.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 CIR013 Marker 143.28 (cM) Automated name-based View Maps
Cotton - GVc - 21 CIR013 Marker 152.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 CIR013 Marker 253.9 (cM) Automated name-based View Maps
Cotton - E3 - 21 CIR013 Marker 210.6 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR013 Marker 62.2 (cM) Automated name-based View Maps
DPL0582 Marker 37.58 Cotton - HDC - 21 DPL0582 Marker 65.1 (cM) Automated name-based View Maps
DPL0777 Marker 38.85 Cotton - Graimondii_physical - Gr_Chr07 DPL0777 Marker Cotton 4,675,191 - 4,675,738 (bp) Automated name-based View Maps
Cotton - HDC - 21 DPL0777 Marker 66.8 (cM) Automated name-based View Maps
DOW092 Marker 40.4 Cotton - Graimondii_physical - Gr_Chr07 DOW092 Marker Cotton 4,818,827 - 4,819,083 (bp) Automated name-based View Maps
Cotton - HDC - 21 DOW092 Marker 68.8 (cM) Automated name-based View Maps
STV069 Marker 42.02 Cotton - HDC - 11 CLU1057 Marker 46.5 (cM) Automated name-based View Maps
Cotton - T3 - 11 STV069 Marker 30.5 (cM) Automated name-based View Maps
Cotton - E3 - 11 STV069 Marker 190.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU1057 Marker 70.9 (cM) Automated name-based View Maps
BNL1034 Marker 43.27 Cotton - T3 - 11 BNL1034 Marker 31.81 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL1034 Marker 195.6 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL1034 Marker 31.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1034b Marker 126.68 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1034 Marker 72.6 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1034 Marker 48 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL1034 Marker 203.6 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL1034 Marker 37.9 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL1034 Marker 137.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL1034 Marker 123.7 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL1034 Marker 164.4 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL1034 Marker 184.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL1034 Marker 91.6 (cM) Automated name-based View Maps
TMB2760 Marker 46.07 Cotton - HDC - 21 TMB2760 Marker 76.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 TMB2760 Marker Cotton 5,891,187 - 5,891,758 (bp) Automated name-based View Maps
DPL0062 Marker 48.79 Cotton - Graimondii_physical - Gr_Chr07 DPL0062 Marker Cotton 6,530,890 - 6,531,453 (bp) Automated name-based View Maps
Cotton - E3 - 21 DPL0062 Marker 191.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 DPL0062 Marker 79.8 (cM) Automated name-based View Maps