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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 2
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 118.38 cM
Features by Type:
60 Marker
60 Total

Map Features

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Items 1 to 25 of 60.       of 3 | Next
Cotton - T3 - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
DPL0046 Marker 63.2 Cotton - HDC - 2 DPL0046 Marker 66.4 (cM) Automated name-based View Maps
Cotton - E3 - 2 DPL0046 Marker 75.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 DPL0046 Marker Cotton 17,293,859 - 17,294,692 (bp) Automated name-based View Maps
MUSB0904 Marker 65.74 Cotton - HDC - 2 MUSB0904 Marker 67 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 MUSB0904 Marker Cotton 34,231,203 - 34,231,833 (bp) Automated name-based View Maps
UCcg10247_108 Marker 66.41 Cotton - Graimondii_physical - Gr_Chr05 UCcg10247_108 Marker Cotton 11,784,515 - 11,784,617 (bp) Automated name-based View Maps
Cotton - HDC - 2 UCcg10247_108 Marker 67.2 (cM) Automated name-based View Maps
JESPR227 Marker 67.27 Cotton - Guazuncho2xVH8-BC1 - c25 JESPR227 Marker 78.9 (cM) Automated name-based View Maps
Cotton - CH - 25 JESPR227 Marker 74.3 (cM) Automated name-based View Maps
Cotton - T3 - 25 JESPR227 Marker 67.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU133 Marker 140.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU133 Marker 69 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 JESPR227 Marker 31.85 (cM) Automated name-based View Maps
Cotton - E3 - 25 JESPR227 Marker 79.2 (cM) Automated name-based View Maps
Cotton - GVc - 25 JESPR227 Marker 65.3 (cM) Automated name-based View Maps
Cotton - TH - 25 JESPR227 Marker 42.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU133 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU133 Marker 67.5 (cM) Automated name-based View Maps
DPL0674 Marker 68.25 Cotton - E3 - 2 DPL0674 Marker 72 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DPL0674 Marker Cotton 10,209,720 - 10,210,405 (bp) Automated name-based View Maps
Cotton - HDC - 2 DPL0674 Marker 67.7 (cM) Automated name-based View Maps
Gh669 Marker 70.79 Cotton - HDC - 2 Gh669 Marker 68.3 (cM) Automated name-based View Maps
Cotton - E3 - 2 Gh669 Marker 67.3 (cM) Automated name-based View Maps
UCcot10111_542 Marker 72.89 Cotton - HDC - 2 UCcot10111_542 Marker 68.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcot10111_542 Marker Cotton 8,263,944 - 8,264,046 (bp) Automated name-based View Maps
UCcg10614_274 Marker 73.65 Cotton - HDC - 2 UCcg10614_274 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcg10614_274 Marker Cotton 7,827,403 - 7,827,505 (bp) Automated name-based View Maps
TMB1578 Marker 73.93 Cotton - Graimondii_physical - Gr_Chr05 TMB1578 Marker Cotton 7,870,020 - 7,870,701 (bp) Automated name-based View Maps
Cotton - HDC - 2 TMB1578 Marker 69.1 (cM) Automated name-based View Maps
JESPR179 Marker 76.19 Cotton - GVc - 14 JESPR179 Marker 38.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR179 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 JESPR179 Marker 51.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 JESPR179 Marker Cotton 7,198,531 - 7,199,048 (bp) Automated name-based View Maps
Cotton - GVc - 2 JESPR179 Marker 35.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 JESPR179 Marker 89.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 JESPR179a Marker 24.57 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 JESPR179 Marker 37.8 (cM) Automated name-based View Maps
Cotton - TH - 2 JESPR179 Marker 61.4 (cM) Automated name-based View Maps
MUSS233 Marker 77.47 Cotton - HDC - 2 CLU2817 Marker 70.9 (cM) Automated name-based View Maps
MUCS230 Marker 77.51 Cotton - HDC - 2 CLU2817 Marker 70.9 (cM) Automated name-based View Maps
MUSB1017 Marker 78.88 Cotton - Graimondii_physical - Gr_Chr05 MUSB1017 Marker Cotton 7,766,417 - 7,767,237 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB1017 Marker 26.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB1017 Marker 72.2 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB1017 Marker 33.8 (cM) Automated name-based View Maps
BNL3512 Marker 84.15 Cotton - E3 - 2 BNL3512 Marker 59.4 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU39 Marker 78.2 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3512 Marker 71.8 (cM) Automated name-based View Maps
BNL1897 Marker 86.46 Cotton - E3 - 2 BNL1897 Marker 59.9 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL1897 Marker 41.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL1897 Marker 28.3 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL1897 Marker 23.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL1897 Marker Cotton 5,570,077 - 5,570,292 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL1897 Marker 15.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL1897 Marker 18.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL1897 Marker 95.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL1897a Marker 18.3 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL1897 Marker 32.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1897b Marker 36 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL1897 Marker 35.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL1897 Marker 80.7 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL1897 Marker 69.1 (cM) Automated name-based View Maps
TMB2386 Marker 89.84 Cotton - E3 - 24 TMB2386 Marker 79.9 (cM) Automated name-based View Maps
Cotton - E3 - 2 TMB2386 Marker 51.5 (cM) Automated name-based View Maps
Cotton - HDC - 2 TMB2386 Marker 84 (cM) Automated name-based View Maps
Cotton - HDC - 14 TMB2386 Marker 117.2 (cM) Automated name-based View Maps
Cotton - E3 - 14 TMB2386 Marker 92.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 TMB2386 Marker 64.2 (cM) Automated name-based View Maps
BNL1434 Marker 95.17 Cotton - Guazuncho2xVH8-BC1 - c2 BNL1434 Marker 15.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL1434b Marker 10.76 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL1434 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL1434 Marker 16.7 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL1434 Marker 88.1 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL1434 Marker 37.6 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL1434 Marker 15.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL1434 Marker 89.3 (cM) Automated name-based View Maps
BNL3972 Marker 105.53 Cotton - HDC - 2 CLU43 Marker 99.6 (cM) Automated name-based View Maps
JESPR156 Marker 112.25 Cotton - HDC - 14 JESPR156 Marker 126.4 (cM) Automated name-based View Maps
Cotton - TH - 14 JESPR156 Marker 104.9 (cM) Automated name-based View Maps
Cotton - T3 - 14 JESPR156 Marker 124.11 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR156 Marker 106.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 JESPR156 Marker Cotton 1,639,474 - 1,640,145 (bp) Automated name-based View Maps
Cotton - E3 - 14 JESPR156 Marker 96.5 (cM) Automated name-based View Maps
Cotton - T3 - 14 JESPR156 Marker 121.34 (cM) Automated name-based View Maps
BNL3545 Marker 117.49 Cotton - T3 - 14 BNL3545 Marker 118.87 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU40 Marker 121.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU40 Marker 111.6 (cM) Automated name-based View Maps
TMB1738 Marker 118.38 Cotton - HDC - 2 CLU40 Marker 111.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU40 Marker 121.2 (cM) Automated name-based View Maps
Cotton - E3 - 2 TMB1738 Marker 10 (cM) Automated name-based View Maps
BNL3424 Marker 0 Cotton - Graimondii_physical - Gr_Chr03 BNL3424 Marker Cotton 338,550 - 338,875 (bp) Automated name-based View Maps
Cotton - HDC - 2 BNL3424 Marker 4.8 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3424 Marker 166.7 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3424 Marker 112.1 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3424 Marker 0 (cM) Automated name-based View Maps
UCcgs10034_277 Marker 3.19 Cotton - Graimondii_physical - Gr_Chr03 UCcgs10034_277 Marker Cotton 325,572 - 325,674 (bp) Automated name-based View Maps
Cotton - HDC - 2 UCcgs10034_277 Marker 8 (cM) Automated name-based View Maps
NAU0895 Marker 3.67 Cotton - HDC - 2 NAU0895 Marker 8.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU0895 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU0895 Marker 111.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 NAU0895 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU0895 Marker 98.9 (cM) Automated name-based View Maps
NAU2265 Marker 3.67 Cotton - Guazuncho2xVH8-RIL - c2 NAU2265 Marker 74.95 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU3518 Marker 8.5 (cM) Automated name-based View Maps
Cotton - T3 - 14 NAU2265 Marker 0.32 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU3518 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU2265 Marker 99.4 (cM) Automated name-based View Maps