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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
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Maps 7
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 128.91 cM
Features by Type:
86 Marker
86 Total

Map Features

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Items 1 to 25 of 86.       of 4 | Next
Cotton - T3 - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
DPL0009 Marker 87.22 Cotton - Graimondii_physical - Gr_Chr01 DPL0009 Marker Cotton 38,791,090 - 38,791,799 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0009 Marker 66.7 (cM) Automated name-based View Maps
HAU0033 Marker 87.31 Cotton - HDC - 7 HAU0033 Marker 66.6 (cM) Automated name-based View Maps
Cotton - E3 - 7 HAU0033 Marker 84.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU525 Marker 55 (cM) Automated name-based View Maps
TMB0694 Marker 87.41 Cotton - HDC - 15 TMB0694 Marker 107.1 (cM) Automated name-based View Maps
Cotton - T3 - 15 TMB0694 Marker 39.88 (cM) Automated name-based View Maps
Cotton - HDC - 7 TMB0694 Marker 66.5 (cM) Automated name-based View Maps
TMB0009 Marker 87.45 Cotton - HDC - 7 TMB0009 Marker 66.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 TMB0009 Marker 45.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 TMB0009 Marker 84.22 (cM) Automated name-based View Maps
TMB0180 Marker 87.53 Cotton - HDC - 7 TMB0180 Marker 66.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 TMB0180 Marker 84.37 (cM) Automated name-based View Maps
Cotton - HDC - 16 TMB0180 Marker 45.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB0180 Marker Cotton 33,291,793 - 33,292,568 (bp) Automated name-based View Maps
Cotton - E3 - 16 TMB0180 Marker 113.7 (cM) Automated name-based View Maps
CM66 Marker 87.57 Cotton - HDC - 16 CM66 Marker 48.3 (cM) Automated name-based View Maps
Cotton - T3 - 16 CM66 Marker 81.85 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CM66 Marker Cotton 30,221,290 - 30,221,512 (bp) Automated name-based View Maps
Cotton - HDC - 7 CM66 Marker 66.3 (cM) Automated name-based View Maps
Cotton - E3 - 7 CM66 Marker 81.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 CM66 Marker 66.4 (cM) Automated name-based View Maps
TMB2844 Marker 87.61 Cotton - Graimondii_physical - Gr_Chr01 TMB2844 Marker Cotton 29,280,002 - 29,280,547 (bp) Automated name-based View Maps
Cotton - HDC - 7 TMB2844 Marker 66.3 (cM) Automated name-based View Maps
Cotton - E3 - 7 TMB2844 Marker 61.4 (cM) Automated name-based View Maps
DPL0112 Marker 87.74 Cotton - HDC - 7 CLU147 Marker 66.3 (cM) Automated name-based View Maps
UCcg11377_165 Marker 87.78 Cotton - HDC - 7 UCcg11377_165 Marker 66.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg11377_165 Marker Cotton 27,818,098 - 27,818,200 (bp) Automated name-based View Maps
TMB0837 Marker 88.03 Cotton - HDC - 7 TMB0837 Marker 66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB0837 Marker Cotton 23,045,393 - 23,045,827 (bp) Automated name-based View Maps
CIR141 Marker 88.09 Cotton - Guazuncho2xVH8-BC1 - c7 CIR141 Marker 86.8 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR141 Marker 36.4 (cM) Automated name-based View Maps
Cotton - E3 - 7 CIR141 Marker 75.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 CIR141 Marker 65.9 (cM) Automated name-based View Maps
Cotton - TH - 7 CIR141 Marker 63 (cM) Automated name-based View Maps
CIR142 Marker 88.47 Cotton - Guazuncho2xVH8-BC1 - c4 CIR142 Marker 197.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CIR142 Marker Cotton 39,344,128 - 39,344,590 (bp) Automated name-based View Maps
Cotton - HDC - 7 CIR142 Marker 65.5 (cM) Automated name-based View Maps
BNL2733 Marker 88.97 Cotton - HDC - 7 BNL2733 Marker 64.9 (cM) Automated name-based View Maps
Cotton - E3 - 7 BNL2733 Marker 89.5 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL2733 Marker 64.3 (cM) Automated name-based View Maps
DPL0403 Marker 89.89 Cotton - HDC - 7 DPL0403 Marker 63.9 (cM) Automated name-based View Maps
Cotton - E3 - 7 DPL0403 Marker 85.1 (cM) Automated name-based View Maps
DPL0652 Marker 90.01 Cotton - E3 - 7 DPL0652 Marker 85 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU188 Marker 63.8 (cM) Automated name-based View Maps
TMB0095 Marker 90.12 Cotton - Graimondii_physical - Gr_Chr01 TMB0095 Marker Cotton 43,051,327 - 43,051,721 (bp) Automated name-based View Maps
Cotton - HDC - 7 TMB0095 Marker 63.7 (cM) Automated name-based View Maps
TMB0104 Marker 90.71 Cotton - Graimondii_physical - Gr_Chr12 TMB0104 Marker Cotton 30,160,666 - 30,161,026 (bp) Automated name-based View Maps
Cotton - HDC - 7 TMB0104 Marker 63 (cM) Automated name-based View Maps
BNL1395 Marker 91.65 Cotton - HDC - 16 BNL1395 Marker 49.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1395 Marker 80.88 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1395 Marker 62 (cM) Automated name-based View Maps
TMB2566 Marker 92.08 Cotton - Graimondii_physical - Gr_Chr01 TMB2566 Marker Cotton 34,330,972 - 34,331,516 (bp) Automated name-based View Maps
Cotton - HDC - 16 TMB2566 Marker 44.7 (cM) Automated name-based View Maps
Cotton - T3 - 16 TMB2566 Marker 84.91 (cM) Automated name-based View Maps
Cotton - HDC - 7 TMB2566 Marker 61.5 (cM) Automated name-based View Maps
BNL1604 Marker 93.22 Cotton - GVc - 7 BNL1604 Marker 28.6 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL1604 Marker 117.9 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1604 Marker 93.8 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL1604 Marker 35.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 BNL1604 Marker 11.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1604 Marker 60.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1604 Marker 35.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL1604 Marker 69.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1604 Marker 92.75 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1604 Marker 60 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1604 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 BNL1604 Marker 70.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 BNL1604 Marker 10.6 (cM) Automated name-based View Maps
Gh548 Marker 93.72 Cotton - E3 - 7 Gh548 Marker 97.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gh548 Marker 59.8 (cM) Automated name-based View Maps
Cotton - E3 - 7 Gh548 Marker 69 (cM) Automated name-based View Maps
DPL0852 Marker 94.28 Cotton - Graimondii_physical - Gr_Chr01 DPL0852 Marker Cotton 45,205,816 - 45,206,470 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0852 Marker 59.2 (cM) Automated name-based View Maps
DOW097 Marker 96.5 Cotton - HDC - 7 DOW097 Marker 57 (cM) Automated name-based View Maps
MUCS443 Marker 97.32 Cotton - HDC - 7 MUCS443 Marker 56.2 (cM) Automated name-based View Maps
MUSB0139 Marker 102.31 Cotton - HDC - 8 MUSB0139 Marker 108.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 MUSB0139 Marker Cotton 57,190,465 - 57,191,116 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0139a Marker 48.76 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0139 Marker 124.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 MUSB0139 Marker 51.2 (cM) Automated name-based View Maps