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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr05
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 Feature Options
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr05
Map Start: 0 bp
Map Stop: 64,110,804 bp
Features by Type:
259 Marker Cotton
259 Total

Map Features

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Items 1 to 25 of 259.       of 11 | Next
Cotton - Graimondii_physical - Gr_Chr05
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1145 Marker Cotton 50,304,474 - 50,305,300 Cotton - GVc - 3 A1145 Marker 57 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 A1145 Marker 67.1 (cM) Automated name-based View Maps
Cotton - PK - c3 A1145 Marker 91 (cM) Automated name-based View Maps
A1148 Marker Cotton 32,916,466 - 32,918,147 Cotton - GVc - 14 A1148 Marker 56.4 (cM) Automated name-based View Maps
Cotton - PK - c14 A1148 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 A1148 Marker 68.7 (cM) Automated name-based View Maps
A1167 Marker Cotton 56,802,354 - 56,803,239 Cotton - PK - c14 A1167 Marker 104.1 (cM) Automated name-based View Maps
A1222 Marker Cotton 50,973,131 - 50,973,936 Cotton - PK - c14 A1222 Marker 90.1 (cM) Automated name-based View Maps
A1325 Marker Cotton 23,203,294 - 23,205,003 Cotton - PK - c2 A1325 Marker 85.9 (cM) Automated name-based View Maps
A1418 Marker Cotton 59,136,037 - 59,136,659 Cotton - PK - c3 A1418 Marker 114.6 (cM) Automated name-based View Maps
A1449 Marker Cotton 51,786,512 - 51,787,006 Cotton - PK - c14 A1449 Marker 93.6 (cM) Automated name-based View Maps
Cotton - PK - c3 A1449 Marker 93.7 (cM) Automated name-based View Maps
A1474 Marker Cotton 48,057,807 - 48,058,480 Cotton - PK - c3 A1474 Marker 82.8 (cM) Automated name-based View Maps
A1497 Marker Cotton 28,127,441 - 28,128,128 Cotton - PK - c14 A1497 Marker 70.2 (cM) Automated name-based View Maps
A1580 Marker Cotton 4,399,188 - 4,399,444 Cotton - PK - c14 A1580 Marker 32.9 (cM) Automated name-based View Maps
A1727 Marker Cotton 57,031,118 - 57,032,150 Cotton - PK - c14 A1727 Marker 105 (cM) Automated name-based View Maps
Cotton - GVc - 14 A1727 Marker 87.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 A1727 Marker 110.7 (cM) Automated name-based View Maps
BNL0226 Marker Cotton 53,481,303 - 53,481,585 Cotton - T3 - 3 BNL0226 Marker 46.98 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL0226 Marker 130.8 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL0226 Marker 120 (cM) Automated name-based View Maps
Cotton - PK - c3 BNL0226 Marker 96.9 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL0226 Marker 62.6 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL0226 Marker 16.7 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL0226 Marker 104.2 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL0226 Marker 78.7 (cM) Automated name-based View Maps
BNL1059 Marker Cotton 35,898,072 - 35,898,293 Cotton - CH - 14 BNL1059 Marker 94.4 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL1059 Marker 14.9 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL1059 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL1059b Marker 26.08 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL1059 Marker 71.1 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL1059 Marker 40.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL1059 Marker 41 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL1059 Marker 37.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1059a Marker 51.63 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL1059 Marker 55.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL1059 Marker 68.7 (cM) Automated name-based View Maps
BNL1897 Marker Cotton 5,570,077 - 5,570,292 Cotton - Guazuncho2xVH8-BC1 - c14 BNL1897 Marker 28.3 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL1897 Marker 41.9 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL1897 Marker 69.1 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL1897 Marker 86.46 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL1897a Marker 18.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL1897 Marker 35.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL1897 Marker 15.1 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL1897 Marker 32.4 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL1897 Marker 23.8 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL1897 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL1897 Marker 18.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1897b Marker 36 (cM) Automated name-based View Maps
BNL2651 Marker Cotton 7,137,496 - 7,137,958 Cotton - E3 - 2 BNL2651 Marker 69.6 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL2651 Marker 77.1 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL2651 Marker 49.2 (cM) Automated name-based View Maps
BNL2877 Marker Cotton 544,698 - 545,241 Cotton - E3 - 2 BNL2877 Marker 2.9 (cM) Automated name-based View Maps
BNL2882 Marker Cotton 39,001,179 - 39,001,766 Cotton - TH - 14 BNL2882 Marker 64.9 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL2882 Marker 75.6 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL2882 Marker 60.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL2882 Marker 75.6 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL2882 Marker 102 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL2882 Marker 79.82 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL2882 Marker 39.5 (cM) Automated name-based View Maps
BNL3034 Marker Cotton 56,263,217 - 56,263,405 Cotton - T3 - 14 BNL3034 Marker 52.8 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL3034 Marker 22.7 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3034 Marker 120.6 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3034 Marker 43.08 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL3034 Marker 54.2 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL3034 Marker 104.1 (cM) Automated name-based View Maps
BNL3145 Marker Cotton 29,187,417 - 29,187,917 Cotton - Guazuncho2xVH8-BC1 - c14 BNL3145 Marker 68.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL3145 Marker 55.7 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3145 Marker 75.79 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3145 Marker 104.6 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL3145 Marker 71.5 (cM) Automated name-based View Maps
BNL3415 Marker Cotton 29,932,171 - 29,932,736 Cotton - E3 - 7 BNL3415 Marker 73 (cM) Automated name-based View Maps
BNL3502 Marker Cotton 17,392,257 - 17,392,687 Cotton - CH - 14 BNL3502 Marker 123.5 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL3502 Marker 68.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL3502 Marker 67.4 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL3502 Marker 54.5 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3502 Marker 68.8 (cM) Automated name-based View Maps
BNL3644 Marker Cotton 1,275,036 - 1,275,397 Cotton - T3 - 14 BNL3644 Marker 122.54 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL3644 Marker 111.7 (cM) Automated name-based View Maps
BNL4017 Marker Cotton 57,765,851 - 57,766,234 Cotton - T3 - 3 BNL4017 Marker 39.66 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL4017 Marker 110.6 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL4017 Marker 47.69 (cM) Automated name-based View Maps
CIR047 Marker Cotton 16,771,136 - 16,771,232 Cotton - Guazuncho2xVH8-RIL - c14 CIR047 Marker 49.72 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR047 Marker 53 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR047 Marker 66.1 (cM) Automated name-based View Maps
CIR084 Marker Cotton 62,421,655 - 62,421,848 Cotton - Guazuncho2xVH8-BC1 - c14 CIR084 Marker 160.6 (cM) Automated name-based View Maps
Cotton - T3 - 14 CIR084 Marker 19.33 (cM) Automated name-based View Maps
Cotton - CH - 14 CIR084 Marker 159.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR084 Marker 128 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR084 Marker 104.1 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR084 Marker 98.1 (cM) Automated name-based View Maps