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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr02
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr02
Map Start: 0 bp
Map Stop: 62,737,583 bp
Features by Type:
258 Marker Cotton
258 Total

Map Features

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Items 26 to 50 of 258.       Previous | of 11 | Next
Cotton - Graimondii_physical - Gr_Chr02
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
BNL3623 Marker Cotton 28,873,552 - 28,874,078 Cotton - GVc - 13 BNL3623 Marker 90.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 BNL3623 Marker 39.15 (cM) Automated name-based View Maps
BNL3652 Marker Cotton 47,541,941 - 47,542,438 Cotton - CH - 15 BNL3652 Marker 86 (cM) Automated name-based View Maps
BNL3778 Marker Cotton 13,820,986 - 13,821,466 Cotton - CH - 1 BNL3778 Marker 80 (cM) Automated name-based View Maps
BNL3848 Marker Cotton 9,809,129 - 9,809,614 Cotton - T3 - 1 BNL3848 Marker 32.01 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3848 Marker 46.6 (cM) Automated name-based View Maps
BNL3902 Marker Cotton 27,696,732 - 27,697,213 Cotton - CH - 15 BNL3902 Marker 92.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL3902 Marker 72.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3902 Marker 91 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL3902 Marker 62.5 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3902 Marker 64.01 (cM) Automated name-based View Maps
BNL4082 Marker Cotton 42,094,327 - 42,094,871 Cotton - Guazuncho2xVH8-BC1 - c15 BNL4082 Marker 91 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL4082 Marker 68.83 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL4082 Marker 61.4 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL4082 Marker 69.4 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL4082 Marker 53.7 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL4082 Marker 69.7 (cM) Automated name-based View Maps
BNL4095 Marker Cotton 15,330,136 - 15,330,669 Cotton - E3 - 15 BNL4095 Marker 90 (cM) Automated name-based View Maps
CIR004 Marker Cotton 16,370,598 - 16,370,967 Cotton - CH - 1 CIR004 Marker 63.4 (cM) Automated name-based View Maps
CIR009 Marker Cotton 62,444,513 - 62,444,847 Cotton - Guazuncho2xVH8-BC1 - c1 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR009 Marker 125.89 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR009 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 15 CIR009 Marker 114.21 (cM) Automated name-based View Maps
CIR015 Marker Cotton 27,206,602 - 27,206,833 Cotton - TH - 15 CIR015 Marker 62.4 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR015 Marker 53.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR015 Marker 91 (cM) Automated name-based View Maps
CIR049 Marker Cotton 16,247,208 - 16,247,592 Cotton - CH - 1 CIR049 Marker 81.6 (cM) Automated name-based View Maps
Cotton - E3 - 1 CIR049 Marker 29.3 (cM) Automated name-based View Maps
CIR089 Marker Cotton 16,149,816 - 16,150,000 Cotton - T3 - 1 CIR089 Marker 44.22 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR089 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR089 Marker 159.6 (cM) Automated name-based View Maps
CIR110 Marker Cotton 418,664 - 418,826 Cotton - CH - 15 CIR110 Marker 182.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR110 Marker 198.3 (cM) Automated name-based View Maps
Cotton - E3 - 15 CIR110 Marker 167.9 (cM) Automated name-based View Maps
Cotton - E3 - 1 CIR110 Marker 115.3 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR110 Marker 150.7 (cM) Automated name-based View Maps
CIR114 Marker Cotton 8,053,263 - 8,053,746 Cotton - Guazuncho2xVH8-RIL - c1 CIR114 Marker 82.11 (cM) Automated name-based View Maps
Cotton - GVc - 1 CIR114 Marker 104.6 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR114 Marker 25.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR114 Marker 196.3 (cM) Automated name-based View Maps
CIR143 Marker Cotton 51,443,337 - 51,443,606 Cotton - Guazuncho2xVH8-BC1 - c15 CIR143 Marker 66.1 (cM) Automated name-based View Maps
Cotton - GVc - 26 CIR143 Marker 84.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 CIR143 Marker 132.1 (cM) Automated name-based View Maps
Cotton - TH - 26 CIR143 Marker 51.1 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR143 Marker 60.7 (cM) Automated name-based View Maps
CIR158 Marker Cotton 11,493,619 - 11,493,999 Cotton - E3 - 15 CIR158 Marker 103.2 (cM) Automated name-based View Maps
Cotton - T3 - 15 CIR158 Marker 26.19 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR158 Marker 90.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR158 Marker 132.2 (cM) Automated name-based View Maps
CIR199 Marker Cotton 61,011,287 - 61,011,554 Cotton - GVc - 1 CIR199 Marker 21.1 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR199 Marker 111.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 CIR199a Marker 12.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR199 Marker 13.9 (cM) Automated name-based View Maps
CIR238 Marker Cotton 3,440,655 - 3,441,218 Cotton - T3 - 7 CIR238 Marker 21.02 (cM) Automated name-based View Maps
CIR307 Marker Cotton 55,891,961 - 55,892,224 Cotton - T3 - 15 CIR307 Marker 75.21 (cM) Automated name-based View Maps
Cotton - TH - 15 CIR307 Marker 72.1 (cM) Automated name-based View Maps
Cotton - E3 - 15 CIR307 Marker 57.8 (cM) Automated name-based View Maps
CIR311 Marker Cotton 7,878,401 - 7,878,882 Cotton - Guazuncho2xVH8-BC1 - c15 CIR311 Marker 142 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR311 Marker 101.3 (cM) Automated name-based View Maps
Cotton - T3 - 15 CIR311 Marker 34 (cM) Automated name-based View Maps
Cotton - CH - 15 CIR311 Marker 135.5 (cM) Automated name-based View Maps
CIR411 Marker Cotton 24,974,697 - 24,974,996 Cotton - GVc - 15 CIR411 Marker 56.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR411 Marker 92.4 (cM) Automated name-based View Maps
CLU1023 Marker Cotton 7,560,302 - 7,561,206 No other positions
CLU105 Marker Cotton 11,188,634 - 11,189,244 No other positions
CLU1183 Marker Cotton 369,813 - 371,123 No other positions
CLU1349 Marker Cotton 2,313,320 - 2,314,652 No other positions