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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Graimondii_physical
(Reference Set) 		Cotton-E3
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Correspondences
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Maps Gr_Chr11 20
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr11
Map Start: 0 bp
Map Stop: 62,589,513 bp
Features by Type:
271 Marker Cotton
271 Total

Map Features

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Items 26 to 50 of 271.       Previous | of 11 | Next
Cotton - Graimondii_physical - Gr_Chr11
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
BNL3790 Marker Cotton 50,292,213 - 50,292,729 Cotton - CH - 10 BNL3790 Marker 52.8 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL3790 Marker 69.3 (cM) Automated name-based View Maps
BNL3838 Marker Cotton 14,104,683 - 14,104,922 Cotton - GVc - 20 BNL3838 Marker 68.5 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL3838 Marker 70 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3838 Marker 117.5 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL3838 Marker 101.6 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3838 Marker 49.66 (cM) Automated name-based View Maps
BNL3895 Marker Cotton 23,404,944 - 23,405,314 Cotton - CH - 10 BNL3895 Marker 29.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL3895 Marker 68.86 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL3895 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3895 Marker 77.9 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL3895 Marker 101.6 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL3895 Marker 71.4 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3895 Marker 60.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL3895 Marker 16.05 (cM) Automated name-based View Maps
BNL3948 Marker Cotton 21,157,864 - 21,158,296 Cotton - CH - 20 BNL3948 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3948 Marker 59.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3948 Marker 135.2 (cM) Automated name-based View Maps
Cotton - PK - c9 BNL3948 Marker 40 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL3948 Marker 99.8 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3948 Marker 60.5 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3948 Marker 82.7 (cM) Automated name-based View Maps
BNL3993 Marker Cotton 38,859,462 - 38,859,844 Cotton - GVc - 20 BNL3993 Marker 93.9 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL3993 Marker 48.5 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL3993 Marker 70.6 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL3993 Marker 90.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3993 Marker 158.3 (cM) Automated name-based View Maps
CIR016 Marker Cotton 46,811,308 - 46,811,776 Cotton - T3 - 10 CIR016 Marker 55.23 (cM) Automated name-based View Maps
CIR043 Marker Cotton 49,769,767 - 49,770,284 Cotton - T3 - 20 CIR043 Marker 72.79 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR043 Marker 110.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR043 Marker 184.4 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR043 Marker 34.2 (cM) Automated name-based View Maps
Cotton - E3 - 20 CIR043 Marker 74.6 (cM) Automated name-based View Maps
CIR061 Marker Cotton 7,381,671 - 7,381,898 Cotton - GVc - 24 CIR061 Marker 95.5 (cM) Automated name-based View Maps
Cotton - GVc - 21 CIR061 Marker 89.4 (cM) Automated name-based View Maps
Cotton - GVc - 23 CIR061 Marker 113.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 CIR061 Marker 109.5 (cM) Automated name-based View Maps
Cotton - GVc - 21 CIR061 Marker 74.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 CIR061 Marker 102 (cM) Automated name-based View Maps
Cotton - GVc - 24 CIR061 Marker 67.1 (cM) Automated name-based View Maps
CIR063 Marker Cotton 30,331,542 - 30,331,809 Cotton - CH - 20 CIR063 Marker 51.4 (cM) Automated name-based View Maps
Cotton - E3 - 20 CIR063 Marker 89.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR063 Marker 151.3 (cM) Automated name-based View Maps
Cotton - T3 - 20 CIR063 Marker 66.73 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR063 Marker 80.5 (cM) Automated name-based View Maps
CIR070 Marker Cotton 15,090,369 - 15,090,613 Cotton - GVc - 24 CIR070 Marker 72.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 CIR070 Marker 113.3 (cM) Automated name-based View Maps
CIR094 Marker Cotton 2,039,966 - 2,040,166 Cotton - TH - 1 CIR094 Marker 76.3 (cM) Automated name-based View Maps
Cotton - TH - 20 CIR094 Marker 62.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR094 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR094 Marker 29.2 (cM) Automated name-based View Maps
CIR095 Marker Cotton 9,938,732 - 9,938,987 Cotton - CH - 13 CIR095 Marker 4 (cM) Automated name-based View Maps
CIR121 Marker Cotton 13,994,355 - 13,994,586 Cotton - T3 - 20 CIR121 Marker 49.44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR121 Marker 116.2 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR121 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR121 Marker 44.03 (cM) Automated name-based View Maps
Cotton - E3 - 20 CIR121 Marker 100.9 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR121 Marker 69.9 (cM) Automated name-based View Maps
CIR166 Marker Cotton 48,926,966 - 48,927,332 Cotton - CH - 10 CIR166 Marker 75.7 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR166 Marker 41.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR166 Marker 180.5 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR166 Marker 105.6 (cM) Automated name-based View Maps
Cotton - E3 - 10 CIR166 Marker 43.6 (cM) Automated name-based View Maps
Cotton - TH - 10 CIR166 Marker 65.8 (cM) Automated name-based View Maps
CIR171 Marker Cotton 43,500,729 - 43,501,031 Cotton - Guazuncho2xVH8-BC1 - c10 CIR171 Marker 54.6 (cM) Automated name-based View Maps
Cotton - E3 - 10 CIR171 Marker 111 (cM) Automated name-based View Maps
Cotton - CH - 10 CIR171 Marker 28.3 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR171 Marker 60.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR171 Marker 161 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR171 Marker 96.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR171b Marker 57.32 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR171a Marker 11.47 (cM) Automated name-based View Maps
CIR305 Marker Cotton 58,501,383 - 58,501,606 Cotton - Guazuncho2xVH8-BC1 - c10 CIR305 Marker 168.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR305b Marker 57.28 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR305 Marker 134.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR305a Marker 47.25 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR305 Marker 134.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR305 Marker 81.9 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR305 Marker 59.9 (cM) Automated name-based View Maps
CIR340 Marker Cotton 52,142,818 - 52,143,074 Cotton - GVc - 20 CIR340 Marker 115 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR340 Marker 189.7 (cM) Automated name-based View Maps
CIR359 Marker Cotton 22,898,758 - 22,898,983 Cotton - CH - 23 CIR359 Marker 99.6 (cM) Automated name-based View Maps
CLU1 Marker Cotton 55,359,448 - 55,359,802 No other positions
CLU10 Marker Cotton 16,256,598 - 16,257,320 No other positions
CLU101 Marker Cotton 41,069,083 - 41,069,421 No other positions
CLU1076 Marker Cotton 40,310,587 - 40,311,488 No other positions
CLU1089 Marker Cotton 50,131,764 - 50,132,582 No other positions
CLU1194 Marker Cotton 13,512,236 - 13,513,472 No other positions
CLU1212 Marker Cotton 47,321,574 - 47,322,468 No other positions