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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Maize-Genetic_map_HK3a
(Reference Set)
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Correspondences
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Maps 1
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HK3a [ View Map Set Info ]
Map Name: 1
Map Start: 0 cM
Map Stop: 174.5 cM
Features by Type:
18 Marker
2 QTL
20 Total

Map Features

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Items 1 to 20 of 20.
Maize - Genetic_map_HK3a - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
bnlg1597 Marker 172.2 Maize - Genetic_map_YY22 - 1 bnlg1597 Marker 352.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 bnlg1597 Marker 211.4 (cM) Automated name-based, Automated name-based View Maps
bnlg1811 Marker 56.3 Maize - Genetic_map_IBM2 - 1 bnlg1811 Marker 268.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 bnlg1811 Marker 97.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_FF1 - 1 bnlg1811 Marker 138.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 1 bnlg1811 Marker 166.7 (cM) Automated name-based, Automated name-based View Maps
bnlg2086 Marker 66.6 Maize - Genetic_map_IBM2 - 1 bnlg2086 Marker 284.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 bnlg2086 Marker 108.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 1 bnlg2086 Marker 138.2 (cM) Automated name-based, Automated name-based View Maps
umc1906 Marker 81.3 Maize - Genetic_map_MN2c - 1 umc1906 Marker 7.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 umc1906 Marker 122.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2b - 1 umc1906 Marker 8.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 1 umc1906 Marker 311.2 (cM) Automated name-based, Automated name-based View Maps
umc1035 Marker 100.3 Maize - Genetic_map_MN2b - 1 umc1035 Marker 12.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2c - 1 umc1035 Marker 22.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 1 umc1035 Marker 378.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 1 umc1035 Marker 229.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 umc1035 Marker 144.7 (cM) Automated name-based, Automated name-based View Maps
phi039 Marker 133.5 No other positions
umc1991 Marker 145.2 Maize - Genetic_map_IBM2 - 1 umc1991 Marker 519.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 umc1991 Marker 193.9 (cM) Automated name-based, Automated name-based View Maps
phi011 Marker 156.7 Maize - Genetic_map_HK3b - 1 phi011 Marker 203.5 (cM) Automated name-based, Automated name-based View Maps
umc1082 Marker 170.2 No other positions
umc1701 Marker 25.6 No other positions
bnlg1597b Marker 174.5 No other positions
dupssr26 Marker 59.8 No other positions
bnlg1884 Marker 71.5 Maize - Genetic_map_HK3b - 1 bnlg1884 Marker 112.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 1 bnlg1884 Marker 127.9 (cM) Automated name-based, Automated name-based View Maps
umc1748 Marker 95.6 Maize - Genetic_map_IBM2 - 1 umc1748 Marker 369.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 umc1748 Marker 140.5 (cM) Automated name-based, Automated name-based View Maps
bnlg1556 Marker 113.1 Maize - Genetic_map_KG1 - 1 bnlg1556 Marker 110.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 1 bnlg1556 Marker 259.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2b - 1 bnlg1556 Marker 15 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 1 bnlg1556 Marker 426.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 1 bnlg1556 Marker 189.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BN6 - 1 bnlg1556 Marker 135 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 bnlg1556 Marker 158.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2a - 1 bnlg1556 Marker 94.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HC4b - 1 bnlg1556 Marker 206.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2c - 1 bnlg1556 Marker 34.3 (cM) Automated name-based, Automated name-based View Maps
umc1245 Marker 136.5 Maize - Genetic_map_KG1 - 1 umc1245 Marker 112.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 1 umc1245 Marker 484.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 1 umc1245 Marker 241.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 1 umc1245 Marker 184.4 (cM) Automated name-based, Automated name-based View Maps
bnlg1643 Marker 146.9 Maize - Genetic_map_HK3b - 1 bnlg1643 Marker 195 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 1 bnlg1643 Marker 321.8 (cM) Automated name-based, Automated name-based View Maps
bnlg1091 Marker 162.7 No other positions
694 QTL 25.6 No other positions
695 QTL 133.5 - 136.5 No other positions