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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_HK3a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 9
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HK3a [ View Map Set Info ]
Map Name: 9
Map Start: 0 cM
Map Stop: 126.4 cM
Features by Type:
10 Marker
2 QTL
12 Total

Map Features

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Items 1 to 12 of 12.
Maize - Genetic_map_HK3a - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
shl Marker 90.6 No other positions
bnlg1272 Marker 126.4 No other positions
umc1231 Marker 25.8 Maize - Genetic_map_IBM2 - 9 umc1231 Marker 262.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 9 umc1231 Marker 118.6 (cM) Automated name-based, Automated name-based View Maps
phi027 Marker 58.3 Maize - Genetic_map_HK3b - 9 phi027 Marker 54.4 (cM) Automated name-based, Automated name-based View Maps
bnlg1401 Marker 70 Maize - Genetic_map_KG1 - 9 bnlg1401 Marker 60.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 9 bnlg1401 Marker 146.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 9 bnlg1401 Marker 49 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_FF1 - 9 bnlg1401 Marker 101.4 (cM) Automated name-based, Automated name-based View Maps
phi033 Marker 84.6 Maize - Genetic_map_HK3b - 9 phi033 Marker 36.9 (cM) Automated name-based, Automated name-based View Maps
umc1279 Marker 120.7 Maize - Genetic_map_HK3b - 9 umc1279 Marker 5.7 (cM) Automated name-based, Automated name-based View Maps
umc1107 Marker 41.9 Maize - Genetic_map_HK3b - 9 umc1107 Marker 73 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 9 umc1107 Marker 236.7 (cM) Automated name-based, Automated name-based View Maps
phi022 Marker 61.1 No other positions
umc1967 Marker 79.9 Maize - Genetic_map_IBM2 - 9 umc1967 Marker 95.5 (cM) Automated name-based, Automated name-based View Maps
709 QTL 25.8 No other positions
708 QTL 25.8 No other positions