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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 2
Map Start: 0 bp
Map Stop: 35.94 bp
Features by Type:
239 Marker
110 QTL
349 Total

Map Features

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Items 26 to 50 of 349.       Previous | of 14 | Next
Rice - Synthethic_map - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM213 Marker 34.652 No other positions
B276B Marker 30.165 Maize - Physical_map_IBM2 - 4 B276B Marker 164.13 (bp) Automated name-based, Automated name-based View Maps
B228B Marker 4.326 - 4.327 Maize - Physical_map_IBM2 - 4 B228B Marker 235.33 (bp) Automated name-based, Automated name-based View Maps
OsAMT1.2 Marker 26.382 - 26.387 No other positions
B243E Marker 9.107 - 9.111 Maize - Physical_map_IBM2 - 5 B243E Marker 138.85 (bp) Automated name-based, Automated name-based View Maps
B252B Marker 17.813 - 17.819 Maize - Physical_map_IBM2 - 4 B252B Marker 101.6 (bp) Automated name-based, Automated name-based View Maps
TGMSP2 Marker 29.546 No other positions
B268E Marker 23.747 - 23.748 Maize - Physical_map_IBM2 - 4 B268E Marker 134.18 (bp) Automated name-based, Automated name-based View Maps
B220E Marker 1.873 - 1.875 Maize - Physical_map_IBM2 - 4 B220E Marker 240.02 - 240.03 (bp) Automated name-based, Automated name-based View Maps
"OsAMT3;3" Marker 20.734 - 20.737 No other positions
B282E Marker 35.298 - 35.302 Maize - Physical_map_IBM2 - 5 B282E Marker 216.36 (bp) Automated name-based, Automated name-based View Maps
B237B Marker 7.183 - 7.188 Maize - Physical_map_IBM2 - 6 B237B Marker 104.84 (bp) Automated name-based, Automated name-based View Maps
RG509 Marker 5.263 No other positions
C499 Marker 20.878 No other positions
B260E Marker 20.182 - 20.186 Maize - Physical_map_IBM2 - 4 B260E Marker 113.88 (bp) Automated name-based, Automated name-based View Maps
RZ962 Marker 34.906 No other positions
B277B Marker 30.282 - 30.283 Maize - Physical_map_IBM2 - 4 B277B Marker 165.65 (bp) Automated name-based, Automated name-based View Maps
B229B Marker 4.691 - 4.693 Maize - Physical_map_IBM2 - 4 B229B Marker 235.27 (bp) Automated name-based, Automated name-based View Maps
OsGPX3 Marker 26.93 - 26.932 No other positions
B245B Marker 9.392 - 9.394 Maize - Physical_map_IBM2 - 5 B245B Marker 138.85 (bp) Automated name-based, Automated name-based View Maps
B252E Marker 18.228 - 18.23 Maize - Physical_map_IBM2 - 4 B252E Marker 103.57 (bp) Automated name-based, Automated name-based View Maps
RG324 Marker 29.762 No other positions
B269E Marker 24.24 - 24.242 Maize - Physical_map_IBM2 - 4 B269E Marker 138.19 (bp) Automated name-based, Automated name-based View Maps
B219E Marker 2.398 - 2.405 Maize - Physical_map_IBM2 - 5 B219E Marker 78.84 - 78.85 (bp) Automated name-based, Automated name-based View Maps
EL5_1 Marker 21.249 - 21.252 No other positions