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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 6
Map Start: 0 bp
Map Stop: 31.25 bp
Features by Type:
236 Marker
59 QTL
295 Total

Map Features

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Items 26 to 50 of 295.       Previous | of 12 | Next
Rice - Synthethic_map - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B532B Marker 23.848 - 23.851 Maize - Physical_map_IBM2 - 9 B532B Marker 89.81 (bp) Automated name-based, Automated name-based View Maps
B484B Marker 2.322 - 2.324 Maize - Physical_map_IBM2 - 6 B484B Marker 72.35 - 72.37 (bp) Automated name-based, Automated name-based View Maps
B548B Marker 28.428 - 28.43 Maize - Physical_map_IBM2 - 6 B548B Marker 90.05 (bp) Automated name-based, Automated name-based View Maps
B500B Marker 6.557 Maize - Physical_map_IBM2 - 9 B500B Marker 5.08 (bp) Automated name-based, Automated name-based View Maps
RM225 Marker 3.417 No other positions
B508E Marker 9.316 - 9.323 Maize - Physical_map_IBM2 - 6 B508E Marker 116.08 (bp) Automated name-based, Automated name-based View Maps
C81 Marker 19.333 No other positions
B524E Marker 21.883 - 21.885 Maize - Physical_map_IBM2 - 9 B524E Marker 60.6 (bp) Automated name-based, Automated name-based View Maps
B477B Marker 0.631 - 0.634 Maize - Physical_map_IBM2 - 9 B477B Marker 26.49 (bp) Automated name-based, Automated name-based View Maps
B541B Marker 26.779 - 26.78 Maize - Physical_map_IBM2 - 9 B541B Marker 108.94 (bp) Automated name-based, Automated name-based View Maps
B492B Marker 4.631 - 4.633 Maize - Physical_map_IBM2 - 9 B492B Marker 11.94 (bp) Automated name-based, Automated name-based View Maps
OsPT9 Marker 12.681 - 12.682 No other positions
B555E Marker 31.071 - 31.077 Maize - Physical_map_IBM2 - 5 B555E Marker 64.79 - 64.8 (bp) Automated name-based, Automated name-based View Maps
B516E Marker 17.556 - 17.562 Maize - Physical_map_IBM2 - 9 B516E Marker 47.07 - 47.08 (bp) Automated name-based, Automated name-based View Maps
RZ682 Marker 26.708 No other positions
B532E Marker 24.23 - 24.234 Maize - Physical_map_IBM2 - 9 B532E Marker 93.35 - 93.36 (bp) Automated name-based, Automated name-based View Maps
B485B Marker 2.583 - 2.584 Maize - Physical_map_IBM2 - 6 B485B Marker 74.24 (bp) Automated name-based, Automated name-based View Maps
B549B Marker 28.7 - 28.706 Maize - Physical_map_IBM2 - 5 B549B Marker 52.42 (bp) Automated name-based, Automated name-based View Maps
B500E Marker 7.319 - 7.323 Maize - Physical_map_IBM2 - 9 B500E Marker 2.12 (bp) Automated name-based, Automated name-based View Maps
RM314 Marker 4.844 No other positions
B557B Marker 31.151 - 31.156 Maize - Physical_map_IBM2 - 5 B557B Marker 65.48 - 65.49 (bp) Automated name-based, Automated name-based View Maps
B509B Marker 9.841 - 9.857 Maize - Physical_map_IBM2 - 9 B509B Marker 36.41 - 36.42 (bp) Automated name-based, Automated name-based View Maps
AAC_CAG7 Marker 19.338 No other positions
B523E Marker 21.964 - 21.968 Maize - Physical_map_IBM2 - 6 B523E Marker 104.27 - 104.28 (bp) Automated name-based, Automated name-based View Maps
B475E Marker 0.657 - 0.659 Maize - Physical_map_IBM2 - 9 B475E Marker 26.56 (bp) Automated name-based, Automated name-based View Maps