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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cocoa-ref_UPA402xUF676
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Maps LG9
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Correspondence		 Always Display
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Features:		 No Yes
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
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Menu Order of Comparative Maps: Predefined
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - ref_UPA402xUF676 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 98.80 cM
Features by Type:
57 Marker
6 QTL
63 Total

Map Features

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Items 1 to 25 of 63.       of 3 | Next
Cocoa - ref_UPA402xUF676 - LG9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ACP Marker 37.60 Cocoa - test - LG9 ACP Marker 37.60 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 ACP Marker 37.60 (cM) Automated name-based View Maps
mTcCIR64 Marker 71.50 Cocoa - test - LG9 mTcCIR64 Marker 71.50 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR64 Marker 71.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR64 Marker 70.20 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR64 Marker 24.00 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR64 Marker 24,083,880.00 - 24,084,545.00 (bp) Automated name-based View Maps
mTcCIR287 Marker 2.60 Cocoa - TSH516 - LG9 mTcCIR287 Marker 94.20 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR287 Marker 0.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR287 Marker 2.60 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR287 Marker 369,414.00 - 369,943.00 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR287 Marker 2.60 (cM) Automated name-based View Maps
mTcCIR285 Marker 16.30 Cocoa - test - LG9 mTcCIR285 Marker 16.30 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR285 Marker 16.30 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR285 Marker 12.90 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR285 Marker 2,249,409.00 - 2,249,967.00 (bp) Automated name-based View Maps
mTcCIR283 Marker 68.40 Cocoa - consensus_disease_res - LG9 mTcCIR283 Marker 68.40 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR283 Marker 68.40 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR283 Marker 24.70 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR283 Marker 68.40 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR283 Marker 24,436,707.00 - 24,437,146.00 (bp) Automated name-based View Maps
mTcCIR266 Marker 10.50 Cocoa - TSH516 - LG9 mTcCIR266 Marker 87.70 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR266 Marker 10.50 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR266 Marker 10.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR266 Marker 6.60 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR266 Marker 1,251,594.00 - 1,252,030.00 (bp) Automated name-based View Maps
mTcCIR251 Marker 25.40 Cocoa - TSH516 - LG9 mTcCIR251 Marker 72.40 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR251 Marker 25.40 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR251 Marker 23.80 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR251 Marker 25.40 (cM) Automated name-based View Maps
mTcCIR250 Marker 15.10 Cocoa - consensus_disease_res - LG9 mTcCIR250 Marker 15.10 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR250 Marker 2,402,639.00 - 2,403,032.00 (bp) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR250 Marker 82.40 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR250 Marker 12.30 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR250 Marker 15.10 (cM) Automated name-based View Maps
mTcCIR243 Marker 0.00 Cocoa - test - LG9 mTcCIR243 Marker 0.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR243 Marker 0.00 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR243 Marker 95.00 (cM) Automated name-based View Maps
mTcCIR212 Marker 61.00 Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR212 Marker 61.30 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR212 Marker 21,920,113.00 - 21,920,674.00 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR212 Marker 61.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR212 Marker 61.00 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR212 Marker 32.70 (cM) Automated name-based View Maps
mTcCIR187 Marker 49.90 Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR187 Marker 48.30 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR187 Marker 49.90 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR187 Marker 14,873,272.00 - 14,873,743.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR187 Marker 49.90 (cM) Automated name-based View Maps
mTcCIR178 Marker 50.00 Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR178 Marker 48.00 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR178 Marker 50.00 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR178 Marker 47.90 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR178 Marker 50.00 (cM) Automated name-based View Maps
mTcCIR172 Marker 18.50 Cocoa - test - LG9 mTcCIR172 Marker 18.50 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR172 Marker 3,316,852.00 - 3,317,347.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR172 Marker 18.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR172 Marker 16.40 (cM) Automated name-based View Maps
mTcCIR166 Marker 20.00 Cocoa - TSH516 - LG9 mTcCIR166 Marker 78.60 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR166 Marker 3,407,637.00 - 3,408,010.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR166 Marker 20.00 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR166 Marker 20.00 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR166 Marker 18.60 (cM) Automated name-based View Maps
mTcCIR160 Marker 43.50 Cocoa - Physical map - Tc09 mTcCIR160 Marker 10,596,965.00 - 10,597,342.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR160 Marker 43.50 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR160 Marker 43.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR160 Marker 41.60 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR160 Marker 55.60 (cM) Automated name-based View Maps
mTcCIR157 Marker 40.10 Cocoa - TSH516 - LG9 mTcCIR157 Marker 58.20 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR157 Marker 38.70 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR157 Marker 40.10 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR157 Marker 40.10 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR157 Marker 9,272,888.00 - 9,273,371.00 (bp) Automated name-based View Maps
mTcCIR154 Marker 95.80 Cocoa - test - LG9 mTcCIR154 Marker 95.80 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR154 Marker 27,933,073.00 - 27,934,047.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR154 Marker 95.80 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR154 Marker 93.80 (cM) Automated name-based View Maps
mTcCIR145 Marker 94.80 Cocoa - Physical map - Tc09 mTcCIR145 Marker 27,796,100.00 - 27,796,392.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR145 Marker 94.80 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR145 Marker 93.00 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR145 Marker 94.80 (cM) Automated name-based View Maps
mTcCIR142 Marker 47.40 Cocoa - consensus_disease_res - LG9 mTcCIR142 Marker 47.40 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR142 Marker 18,433,136.00 - 18,433,580.00 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR142 Marker 47.40 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR142 Marker 50.00 (cM) Automated name-based View Maps
mTcCIR126 Marker 12.60 Cocoa - TSH516 - LG9 mTcCIR126 Marker 85.20 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR126 Marker 9.70 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR126 Marker 1,731,846.00 - 1,732,344.00 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR126 Marker 12.60 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR126 Marker 12.60 (cM) Automated name-based View Maps
mTcCIR125 Marker 49.40 Cocoa - Physical map - Tc09 mTcCIR125 Marker 14,052,020.00 - 14,052,124.00 (bp) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR125 Marker 47.70 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR125 Marker 49.40 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR125 Marker 49.40 (cM) Automated name-based View Maps
mTcCIR124 Marker 49.10 Cocoa - consensus_disease_res - LG9 mTcCIR124 Marker 49.10 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR124 Marker 49.10 (cM) Automated name-based View Maps
mTcCIR114 Marker 50.60 Cocoa - Physical map - Tc09 mTcCIR114 Marker 16,408,862.00 - 16,409,142.00 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR114 Marker 50.60 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR114 Marker 50.60 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR114 Marker 48.80 (cM) Automated name-based View Maps
mTcCIR98 Marker 72.60 Cocoa - test - LG9 mTcCIR98 Marker 72.60 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR98 Marker 24,559,441.00 - 24,560,008.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR98 Marker 72.60 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR98 Marker 24.00 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR98 Marker 70.50 (cM) Automated name-based View Maps
mTcCIR96 Marker 78.50 Cocoa - Physical map - Tc09 mTcCIR96 Marker 26,896,704.00 - 26,896,955.00 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR96 Marker 78.50 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG9 mTcCIR96 Marker 78.90 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR96 Marker 78.50 (cM) Automated name-based View Maps