CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-ref_UPA402xUF676
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - ref_UPA402xUF676 [ View Map Set Info ]
Map Name: LG2
Map Start: 0 cM
Map Stop: 100.9 cM
Features by Type:
55 Marker
3 QTL
58 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 58.       Previous | of 3 | Next
Cocoa - ref_UPA402xUF676 - LG2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
N1072 Marker 18.9 No other positions
gTcCIR161 Marker 24.5 Cocoa - consensus_disease_res - LG2 gTcCIR161 Marker 24.5 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG2 gTcCIR161 Marker 22.8 (cM) Automated name-based View Maps
Cocoa - test - LG2 gTcCIR161 Marker 24.5 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG2 gTcCIR161 Marker 26.8 (cM) Automated name-based View Maps
gTcCIR140 Marker 22.7 Cocoa - test - LG2 gTcCIR140 Marker 22.7 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 gTcCIR140 Marker 22.7 (cM) Automated name-based View Maps
cTcCIR246 Marker 44.9 Cocoa - test - LG2 cTcCIR246 Marker 44.9 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR246 Marker 44.9 (cM) Automated name-based View Maps
cTcCIR43 Marker 44.5 Cocoa - SSR_SNP_consensus_map - LG2 cTcCIR43 Marker 51.2 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR43 Marker 44.5 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG2 cTcCIR43 Marker 46.3 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR43 Marker 44.5 (cM) Automated name-based View Maps
cTcCIR249 Marker 46.2 Cocoa - DR1xCatongo - LG2 cTcCIR249 Marker 52.1 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG2 cTcCIR249 Marker 28.8 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR249 Marker 46.2 (cM) Automated name-based View Maps
Cocoa - IMC78xCatongo - LG2 cTcCIR249 Marker 40.2 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR249 Marker 46.2 (cM) Automated name-based View Maps
rTcCIR133 Marker 58.4 Cocoa - consensus_disease_res - LG2 rTcCIR133 Marker 58.4 (cM) Automated name-based View Maps
Cocoa - test - LG2 rTcCIR133 Marker 58.4 (cM) Automated name-based View Maps
cTcCIR86 Marker 60.8 Cocoa - consensus_disease_res - LG2 cTcCIR86 Marker 60.8 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR86 Marker 60.8 (cM) Automated name-based View Maps
gTcCIR149 Marker 63.8 Cocoa - consensus_disease_res - LG2 gTcCIR149 Marker 63.8 (cM) Automated name-based View Maps
Cocoa - test - LG2 gTcCIR149 Marker 63.8 (cM) Automated name-based View Maps
cTcCIR23 Marker 64.4 Cocoa - consensus_disease_res - LG2 cTcCIR23 Marker 64.4 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR23 Marker 64.4 (cM) Automated name-based View Maps
gTcCIR156 Marker 76 Cocoa - consensus_disease_res - LG2 gTcCIR156 Marker 76 (cM) Automated name-based View Maps
Cocoa - test - LG2 gTcCIR156 Marker 76 (cM) Automated name-based View Maps
cTcCIR76 Marker 75.7 Cocoa - consensus_disease_res - LG2 cTcCIR76 Marker 75.7 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR76 Marker 75.7 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG2 cTcCIR76 Marker 112.8 (cM) Automated name-based View Maps
cTcCIR211 Marker 83.2 Cocoa - consensus_disease_res - LG2 cTcCIR211 Marker 83.2 (cM) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR211 Marker 83.2 (cM) Automated name-based View Maps
cTcCIR213 Marker 85.1 Cocoa - Physical map - Tc02 cTcCIR213 Marker 26,086,870 - 26,087,006 (bp) Automated name-based View Maps
Cocoa - test - LG2 cTcCIR213 Marker 85.1 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 cTcCIR213 Marker 85.9 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR213 Marker 85.1 (cM) Automated name-based View Maps
cTcCIR250 Marker 78.2 Cocoa - test - LG2 cTcCIR250 Marker 78.2 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR250 Marker 78.2 (cM) Automated name-based View Maps
gTcCIR151 Marker 100.9 Cocoa - SSR_SNP_consensus_map - LG2 gTcCIR151 Marker 101.1 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 gTcCIR151 Marker 27,542,571 - 27,542,982 (bp) Automated name-based View Maps
Cocoa - test - LG2 gTcCIR151 Marker 100.9 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 gTcCIR151 Marker 100.9 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG2 gTcCIR151 Marker 112.2 (cM) Automated name-based View Maps
Cocoa - S52xCatongo - LG2 gTcCIR151 Marker 89.8 (cM) Automated name-based View Maps
C119 Marker 60.5 Cocoa - consensus_disease_res - LG2 C119 Marker 60.5 (cM) Automated name-based View Maps
Cocoa - test - LG2 C119 Marker 60.5 (cM) Automated name-based View Maps
C37 Marker 55.5 Cocoa - consensus_disease_res - LG2 C37 Marker 55.5 (cM) Automated name-based View Maps
Cocoa - test - LG2 C37 Marker 55.5 (cM) Automated name-based View Maps
CA18 Marker 66.6 Cocoa - test - LG2 CA18 Marker 66.6 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 CA18 Marker 66.6 (cM) Automated name-based View Maps
cot3932 Marker 1.3 Cocoa - Physical map - Tc02 cot3932 Marker 713,638 - 714,009 (bp) Automated name-based View Maps
Cocoa - test - LG2 cot3932 Marker 1.3 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 cot3932 Marker 6.2 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cot3932 Marker 1.3 (cM) Automated name-based View Maps
cTcCIR252 Marker 21.6 Cocoa - test - LG2 cTcCIR252 Marker 21.6 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 cTcCIR252 Marker 21.6 (cM) Automated name-based View Maps
PGM/H Marker 69.7 Cocoa - consensus_disease_res - LG2 PGM/H Marker 69.7 (cM) Automated name-based View Maps
Cocoa - test - LG2 PGM/H Marker 69.7 (cM) Automated name-based View Maps
PTSCA6/A7 Marker 81.4 Cocoa - consensus_disease_res - LG2 PTSCA6/A7 Marker 81.4 (cM) Automated name-based View Maps
Cocoa - test - LG2 PTSCA6/A7 Marker 81.4 (cM) Automated name-based View Maps
mTcCIR165 Marker 54.2 Cocoa - test - LG2 mTcCIR165 Marker 54.2 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG2 mTcCIR165 Marker 49.3 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR165 Marker 58 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR165 Marker 54.2 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR165 Marker 14,820,025 - 14,820,530 (bp) Automated name-based View Maps
mTcCIR162 Marker 60.8 Cocoa - test - LG2 mTcCIR162 Marker 60.8 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG2 mTcCIR162 Marker 60.8 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG2 mTcCIR162 Marker 56.9 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR162 Marker 65.1 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc02 mTcCIR162 Marker 19,241,845 - 19,242,455 (bp) Automated name-based View Maps