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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cocoa-ref_UPA402xUF676
(Reference Set)
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Maps LG4
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - ref_UPA402xUF676 [ View Map Set Info ]
Map Name: LG4
Map Start: 0 cM
Map Stop: 75.3 cM
Features by Type:
55 Marker
2 QTL
57 Total

Map Features

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Items 51 to 57 of 57.       Previous | of 3
Cocoa - ref_UPA402xUF676 - LG4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
gTcCIR146 Marker 4.6 Cocoa - consensus_disease_res - LG4 gTcCIR146 Marker 4.6 (cM) Automated name-based View Maps
Cocoa - test - LG4 gTcCIR146 Marker 4.6 (cM) Automated name-based View Maps
gTcCIR112 Marker 7.3 Cocoa - consensus_disease_res - LG4 gTcCIR112 Marker 7.3 (cM) Automated name-based View Maps
Cocoa - test - LG4 gTcCIR112 Marker 7.3 (cM) Automated name-based View Maps
cTcCIR232 Marker 25.9 Cocoa - consensus_disease_res - LG4 cTcCIR232 Marker 25.9 (cM) Automated name-based View Maps
Cocoa - test - LG4 cTcCIR232 Marker 25.9 (cM) Automated name-based View Maps
gTcCIR128 Marker 25.7 Cocoa - Physical map - Tc02 gTcCIR128 Marker 598,870 - 599,232 (bp) Automated name-based View Maps
Cocoa - test - LG4 gTcCIR128 Marker 25.7 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG4 gTcCIR128 Marker 23.6 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG4 gTcCIR128 Marker 25.7 (cM) Automated name-based View Maps
N1102 Marker 16.6 No other positions
ref_FAT/NIRS_lg4 QTL 57 No other positions
ref_ACD_lg4 QTL 29.6 No other positions