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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cocoa-ref_UPA402xUF676
(Reference Set)
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Correspondences
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Maps LG5
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - ref_UPA402xUF676 [ View Map Set Info ]
Map Name: LG5
Map Start: 0 cM
Map Stop: 73.3 cM
Features by Type:
61 Marker
61 Total

Map Features

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Items 51 to 61 of 61.       Previous | of 3
Cocoa - ref_UPA402xUF676 - LG5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
cTcCIR68 Marker 44.9 Cocoa - test - LG5 cTcCIR68 Marker 44.9 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG5 cTcCIR68 Marker 44.9 (cM) Automated name-based View Maps
cTcCIR229 Marker 49.3 Cocoa - test - LG5 cTcCIR229 Marker 49.3 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG5 cTcCIR229 Marker 49.3 (cM) Automated name-based View Maps
N1333 Marker 54.8 No other positions
cTcCIR81 Marker 62.1 Cocoa - consensus_disease_res - LG5 cTcCIR81 Marker 62.1 (cM) Automated name-based View Maps
Cocoa - test - LG5 cTcCIR81 Marker 62.1 (cM) Automated name-based View Maps
cTcCIR216 Marker 65.5 Cocoa - consensus_disease_res - LG5 cTcCIR216 Marker 65.5 (cM) Automated name-based View Maps
Cocoa - test - LG5 cTcCIR216 Marker 65.5 (cM) Automated name-based View Maps
cTcCIR231 Marker 67.7 Cocoa - test - LG5 cTcCIR231 Marker 67.7 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG5 cTcCIR231 Marker 67.7 (cM) Automated name-based View Maps
cTcCIR234 Marker 70.1 Cocoa - test - LG5 cTcCIR234 Marker 70.1 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG5 cTcCIR234 Marker 70.1 (cM) Automated name-based View Maps
C164 Marker 58.2 Cocoa - test - LG5 C164 Marker 58.2 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG5 C164 Marker 58.2 (cM) Automated name-based View Maps
CA24 Marker 26.6 Cocoa - consensus_disease_res - LG5 CA24 Marker 26.6 (cM) Automated name-based View Maps
Cocoa - test - LG5 CA24 Marker 26.6 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc05 CA24 Marker 8,575,679 - 8,575,889 (bp) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG5 CA24 Marker 25.7 (cM) Automated name-based View Maps
PR2/18 Marker 33 Cocoa - consensus_disease_res - LG5 PR2/18 Marker 33 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG5 PR2/18 Marker 31.7 (cM) Automated name-based View Maps
Cocoa - test - LG5 PR2/18 Marker 33 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc05 PR2/18 Marker 14,642,948 - 14,643,462 (bp) Automated name-based View Maps
PR2/36 Marker 36.5 Cocoa - consensus_disease_res - LG5 PR2/36 Marker 36.5 (cM) Automated name-based View Maps
Cocoa - test - LG5 PR2/36 Marker 36.5 (cM) Automated name-based View Maps