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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set) 		Cotton-Graimondii_physical
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Maps 22 Gr_Chr12
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 22
Map Start: 0 cM
Map Stop: 167.4 cM
Features by Type:
78 Marker
78 Total

Map Features

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Items 51 to 75 of 78.       Previous | of 4 | Next
Cotton - E3 - 22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU0938 Marker 75 Cotton - Graimondii_physical - Gr_Chr12 HAU0938 Marker Cotton 27,423,103 - 27,424,650 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU0938 Marker 64.6 (cM) Automated name-based View Maps
HAU1790 Marker 73.2 Cotton - Graimondii_physical - Gr_Chr12 HAU1790 Marker Cotton 29,241,128 - 29,241,544 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU1790 Marker 67.7 (cM) Automated name-based View Maps
CIR036 Marker 72.3 Cotton - GVc - 22 CIR036 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR036 Marker 25.7 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR036 Marker 73.77 (cM) Automated name-based View Maps
Cotton - HDC - 22 CIR036 Marker 69.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR036 Marker Cotton 30,348,202 - 30,348,409 (bp) Automated name-based View Maps
BNL0358 Marker 71 Cotton - HDC - 22 BNL0358 Marker 70.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL0358 Marker Cotton 30,805,743 - 30,806,061 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL358 Marker 25.7 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL0358 Marker 28.6 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL0358 Marker 66.4 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0358 Marker 43.3 (cM) Automated name-based View Maps
HAU3083 Marker 69.1 Cotton - HDC - 22 CLU1794 Marker 71.3 (cM) Automated name-based View Maps
Gh330 Marker 66.8 Cotton - HDC - 22 Gh330 Marker 84.2 (cM) Automated name-based View Maps
Cotton - T3 - 22 Gh330 Marker 90.42 (cM) Automated name-based View Maps
STV112 Marker 64.1 Cotton - Graimondii_physical - Gr_Chr07 STV112 Marker Cotton 3,536,720 - 3,537,242 (bp) Automated name-based View Maps
Cotton - HDC - 22 STV112 Marker 74.6 (cM) Automated name-based View Maps
HAU0747 Marker 61.8 Cotton - HDC - 22 CLU702 Marker 76.1 (cM) Automated name-based View Maps
HAU0086 Marker 60 Cotton - Graimondii_physical - Gr_Chr12 HAU0086 Marker Cotton 32,303,880 - 32,304,574 (bp) Automated name-based View Maps
Cotton - HDC - 4 HAU0086 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 HAU0086 Marker 77.3 (cM) Automated name-based View Maps
Cotton - E3 - 4 HAU0086 Marker 53.8 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
Cotton - T3 - 4 HAU0086 Marker 75.53 (cM) Automated name-based View Maps
Cotton - T3 - 22 HAU0086 Marker 82.07 (cM) Automated name-based View Maps
BNL4030 Marker 57.5 Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - HDC - 5 BNL4030 Marker 25.9 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 24.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
NAU2291 Marker 57.2 Cotton - Guazuncho2xVH8-RIL - c22 NAU2291a Marker 22.68 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3843 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU3843 Marker 74.3 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU2291 Marker 81.83 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 NAU2291b Marker 16.93 (cM) Automated name-based View Maps
Cotton - T3 - 4 NAU2291 Marker 75.38 (cM) Automated name-based View Maps
Cotton - GVc - 22 NAU2291 Marker 22.5 (cM) Automated name-based View Maps
Cotton - GVc - 4 NAU2291 Marker 20.9 (cM) Automated name-based View Maps
HAU0558 Marker 52.2 Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU743 Marker 76.7 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU743 Marker 74.8 (cM) Automated name-based View Maps
HAU3012 Marker 50.7 Cotton - Graimondii_physical - Gr_Chr10 HAU3012 Marker Cotton 51,116,037 - 51,117,328 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU3012 Marker 79.1 (cM) Automated name-based View Maps
NAU3868 Marker 44.2 Cotton - E3 - 23 NAU3868 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU3868 Marker 21.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU3868 Marker 83.4 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3868 Marker 38.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU3868 Marker 85.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3868 Marker Cotton 33,338,349 - 33,339,264 (bp) Automated name-based View Maps
NAU5294 Marker 42.9 Cotton - HDC - 5 CLU886 Marker 97.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU886 Marker 95.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU886 Marker 88.3 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU5294 Marker 98.3 (cM) Automated name-based View Maps
MUSB1112 Marker 42 Cotton - HDC - 22 MUSB1112 Marker 88.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 MUSB1112 Marker 88.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUSB1112 Marker Cotton 33,407,659 - 33,408,795 (bp) Automated name-based View Maps
Cotton - T3 - 22 MUSB1112 Marker 93.03 (cM) Automated name-based View Maps
Cotton - E3 - 4 MUSB1112 Marker 32.1 (cM) Automated name-based View Maps
HAU1071 Marker 41.3 Cotton - HDC - 5 CLU886 Marker 97.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU886 Marker 95.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU886 Marker 88.3 (cM) Automated name-based View Maps
NAU2932 Marker 40.1 Cotton - HDC - 19 CLU886 Marker 95.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU2932 Marker 131.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU886 Marker 88.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU886 Marker 97.3 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU2932 Marker 92.1 (cM) Automated name-based View Maps
Gh152 Marker 39.2 Cotton - HDC - 22 Gh152 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gh152 Marker Cotton 33,625,696 - 33,626,466 (bp) Automated name-based View Maps
NAU3386 Marker 32.1 Cotton - HDC - 4 CLU3877 Marker 88.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3877 Marker 102.1 (cM) Automated name-based View Maps
NAU2235 Marker 31.3 Cotton - GVc - 22 NAU2235 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU2235 Marker 115 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 NAU2235b Marker 3.59 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU3877 Marker 88.6 (cM) Automated name-based View Maps
Cotton - GVc - 4 NAU2235 Marker 5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 NAU2235a Marker 3.48 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3877 Marker 102.1 (cM) Automated name-based View Maps
NAU3791 Marker 30.1 Cotton - HDC - 4 NAU3791 Marker 86.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3791 Marker Cotton 34,539,101 - 34,539,850 (bp) Automated name-based View Maps
Cotton - HDC - 22 NAU3791 Marker 98.3 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3791 Marker 62.8 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU3791 Marker 108.5 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU3791 Marker 110.7 (cM) Automated name-based View Maps
BNL3873 Marker 29.7 Cotton - Graimondii_physical - Gr_Chr12 BNL3873 Marker Cotton 34,581,981 - 34,582,520 (bp) Automated name-based View Maps
Cotton - GVc - 22 BNL3873 Marker 0.4 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL3873 Marker 7.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL3873 Marker 4.17 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL3873 Marker 103.58 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL3873 Marker 95.8 (cM) Automated name-based View Maps
NAU3777 Marker 29.3 Cotton - HDC - 4 CLU864 Marker 66.3 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3777 Marker 64.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU864 Marker 108.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU864 Marker 96.5 (cM) Automated name-based View Maps
TMB1648 Marker 28.9 Cotton - T3 - 22 TMB1648 Marker 105.36 (cM) Automated name-based View Maps
Cotton - T3 - 4 TMB1648 Marker 101.58 (cM) Automated name-based View Maps
Cotton - HDC - 4 TMB1648 Marker 100.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 TMB1648 Marker 97.2 (cM) Automated name-based View Maps