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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set) 		Cotton-HDC
Min.
Correspondences
Align Vertically
Stack
Maps 7 7
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 128.91 cM
Features by Type:
86 Marker
86 Total

Map Features

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Items 51 to 75 of 86.       Previous | of 4 | Next
Cotton - T3 - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
DOW078 Marker 54.7 Cotton - Graimondii_physical - Gr_Chr01 DOW078 Marker Cotton 12,565,410 - 12,565,666 (bp) Automated name-based View Maps
Cotton - HDC - 7 DOW078 Marker 98.6 (cM) Automated name-based View Maps
CIR169 Marker 57.28 Cotton - CH - 16 CIR169 Marker 142.4 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR169 Marker 66.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 CIR169 Marker 95.4 (cM) Automated name-based View Maps
Cotton - E3 - 7 CIR169 Marker 41.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR169 Marker 150.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 CIR169 Marker 36.21 (cM) Automated name-based View Maps
UCcg10770_168 Marker 58.11 Cotton - HDC - 7 UCcg10770_168 Marker 94.4 (cM) Automated name-based View Maps
UCcg10921_202 Marker 59.26 Cotton - HDC - 7 UCcg10921_202 Marker 93.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg10921_202 Marker Cotton 13,648,113 - 13,648,215 (bp) Automated name-based View Maps
UCcg11440_119 Marker 59.34 Cotton - Graimondii_physical - Gr_Chr01 UCcg11440_119 Marker Cotton 13,427,419 - 13,427,521 (bp) Automated name-based View Maps
Cotton - HDC - 7 UCcg11440_119 Marker 93 (cM) Automated name-based View Maps
UCcg10296_250 Marker 59.91 Cotton - HDC - 7 UCcg10296_250 Marker 92.4 (cM) Automated name-based View Maps
MUSB0463 Marker 63.12 Cotton - GVc - 7 MUSB0463 Marker 59.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 MUSB0463 Marker Cotton 52,138,688 - 52,139,840 (bp) Automated name-based View Maps
Cotton - HDC - 7 MUSB0463 Marker 88.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 MUSB0463 Marker 32.68 (cM) Automated name-based View Maps
BNL0580 Marker 64.88 Cotton - E3 - 16 BNL0580 Marker 78.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL0580 Marker 72.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL0580 Marker 56.53 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL0580 Marker Cotton 15,030,457 - 15,030,838 (bp) Automated name-based View Maps
Cotton - HDC - 7 BNL0580 Marker 87.6 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL0580 Marker 48.3 (cM) Automated name-based View Maps
MUSB0625 Marker 66.46 Cotton - T3 - 10 MUSB0625 Marker 92.71 (cM) Automated name-based View Maps
Cotton - HDC - 7 MUSB0625 Marker 86.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 MUSB0625 Marker Cotton 41,631,852 - 41,632,650 (bp) Automated name-based View Maps
Cotton - HDC - 10 MUSB0625 Marker 122.4 (cM) Automated name-based View Maps
UCcg10600_133 Marker 67.82 Cotton - HDC - 7 UCcg10600_133 Marker 85.9 (cM) Automated name-based View Maps
MUSS006 Marker 68.54 Cotton - HDC - 7 MUSS006 Marker 85.5 (cM) Automated name-based View Maps
UCcg11026_617 Marker 68.65 Cotton - HDC - 7 UCcg11026_617 Marker 85.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg11026_617 Marker Cotton 16,148,156 - 16,148,258 (bp) Automated name-based View Maps
MUCS006 Marker 69.53 Cotton - HDC - 9 CLU2700 Marker 118.6 (cM) Automated name-based View Maps
Cotton - E3 - 23 MUCS006 Marker 150.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU2700 Marker 84.9 (cM) Automated name-based View Maps
Cotton - CH - 23 MUCS006 Marker 12.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2700 Marker 134.7 (cM) Automated name-based View Maps
STV023 Marker 70.79 Cotton - E3 - 16 STV023 Marker 43 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU3976 Marker 84.1 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU3976 Marker 68 (cM) Automated name-based View Maps
Cotton - T3 - 16 STV023 Marker 62.83 (cM) Automated name-based View Maps
MUCS253 Marker 72.61 Cotton - HDC - 7 MUCS253 Marker 82.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUCS253 Marker Cotton 29,910,412 - 29,911,686 (bp) Automated name-based View Maps
MUCS258 Marker 73.02 Cotton - HDC - 7 CLU218 Marker 81.1 (cM) Automated name-based View Maps
MUSS243 Marker 73.66 Cotton - HDC - 7 CLU218 Marker 81.1 (cM) Automated name-based View Maps
UCcot10272_724 Marker 74.2 Cotton - HDC - 7 UCcot10272_724 Marker 80.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcot10272_724 Marker Cotton 18,220,960 - 18,221,062 (bp) Automated name-based View Maps
DPL0751 Marker 75.02 Cotton - Graimondii_physical - Gr_Chr08 DPL0751 Marker Cotton 51,607,002 - 51,607,684 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0751 Marker 79.6 (cM) Automated name-based View Maps
UCcg11001_185 Marker 75.96 Cotton - HDC - 7 UCcg11001_185 Marker 78.5 (cM) Automated name-based View Maps
DPL0292 Marker 77.01 Cotton - Graimondii_physical - Gr_Chr01 DPL0292 Marker Cotton 19,019,669 - 19,020,293 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0292 Marker 77.4 (cM) Automated name-based View Maps
Cotton - E3 - 7 DPL0292 Marker 62.7 (cM) Automated name-based View Maps
DPL0234 Marker 78.53 Cotton - HDC - 7 DPL0234 Marker 75.8 (cM) Automated name-based View Maps
BNL3319 Marker 79.84 Cotton - E3 - 7 BNL3319 Marker 52.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3319 Marker 70.99 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3319 Marker 60 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3319 Marker 57.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3319 Marker 96.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL3319 Marker 74.4 (cM) Automated name-based View Maps
TMB1844 Marker 80.15 Cotton - HDC - 7 TMB1844 Marker 74.1 (cM) Automated name-based View Maps
TMB1561 Marker 80.58 Cotton - HDC - 7 TMB1561 Marker 73.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB1561 Marker Cotton 20,255,746 - 20,256,468 (bp) Automated name-based View Maps