CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-CH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 25
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - CH [ View Map Set Info ]
Map Name: 25
Map Start: 0 cM
Map Stop: 113.1 cM
Features by Type:
22 Marker
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Cotton - CH - 25
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR109 Marker 5.8 Cotton - Guazuncho2xVH8-BC1 - c25 CIR109 Marker 11.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU63 Marker 153 (cM) Automated name-based View Maps
Cotton - E3 - 25 CIR109 Marker 17.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU63 Marker 137.9 (cM) Automated name-based View Maps
Cotton - GVc - 25 CIR109 Marker 11.5 (cM) Automated name-based View Maps
CIR298 Marker 9.8 Cotton - GVc - 6 CIR298 Marker 12.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR298 Marker Cotton 616,828 - 617,043 (bp) Automated name-based View Maps
Cotton - E3 - 25 CIR298 Marker 15.8 (cM) Automated name-based View Maps
Cotton - HDC - 25 CIR298 Marker 138.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR298 Marker 139.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR298 Marker 0 (cM) Automated name-based View Maps
BNL0584 Marker 10.4 Cotton - T3 - 6 BNL0584 Marker 123.04 (cM) Automated name-based View Maps
Cotton - E3 - 6 BNL0584 Marker 17.3 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL0584 Marker 9.3 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL0584 Marker 116.44 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL0584 Marker 124.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL0584 Marker 145.2 (cM) Automated name-based View Maps
CIR267 Marker 14.7 Cotton - GVc - 25 CIR267 Marker 8.7 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR267 Marker 6.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 CIR267 Marker 14 (cM) Automated name-based View Maps
Cotton - CH - 6 CIR267 Marker 6.2 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR267 Marker 146 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR267 Marker 9.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 CIR267 Marker 140.7 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR267 Marker 123.99 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR267 Marker Cotton 918,581 - 918,774 (bp) Automated name-based View Maps
BNL1061 Marker 39.3 Cotton - PK - c22 BNL1061 Marker 33.2 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL1061 Marker 40 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1061 Marker 85.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1061 Marker 39 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1061 Marker 45.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1061b Marker 11.64 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL1061a Marker 38.36 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1061 Marker 25.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1061 Marker 33.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU6 Marker 61 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL1061 Marker 47.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL1061 Marker 33.8 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU6 Marker 116 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU6 Marker 121.7 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1061 Marker 104.28 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1061 Marker 55.3 (cM) Automated name-based View Maps
BNL1047 Marker 41.4 Cotton - E3 - 25 BNL1047 Marker 45.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1047 Marker 33.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL1047 Marker 47.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1047 Marker 40.1 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1047 Marker 126.88 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL1047 Marker 48.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1047 Marker 29.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL1047 Marker 32.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU6 Marker 116 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL1047 Marker 39.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU6 Marker 121.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU6 Marker 61 (cM) Automated name-based View Maps
CIR280 Marker 47.3 Cotton - Guazuncho2xVH8-RIL - c25 CIR280a Marker 18.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 CIR280 Marker 100.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR280 Marker 116.5 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR280 Marker 86.72 (cM) Automated name-based View Maps
Cotton - E3 - 6 CIR280 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 CIR280 Marker 101.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 CIR280 Marker 54.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR280 Marker 32.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR280 Marker Cotton 5,058,537 - 5,059,128 (bp) Automated name-based View Maps
Cotton - TH - 6 CIR280 Marker 103.1 (cM) Automated name-based View Maps
Cotton - GVc - 25 CIR280 Marker 46.8 (cM) Automated name-based View Maps
Cotton - CH - 6 CIR280 Marker 60.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR280 Marker 154.3 (cM) Automated name-based View Maps
BNL1517 Marker 66.4 Cotton - HDC - 25 BNL1517 Marker 71.9 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1517 Marker 45.5 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1517 Marker 79.2 (cM) Automated name-based View Maps
BNL3806 Marker 68.3 Cotton - Guazuncho2xVH8-BC1 - c25 BNL3806 Marker 62.7 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3806 Marker 59.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL3806 Marker 48 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3806 Marker 66.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL3806 Marker 90.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3806 Marker 55.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL3806 Marker Cotton 10,181,798 - 10,182,438 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL3806 Marker 24.85 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL3806 Marker 70.89 (cM) Automated name-based View Maps
JESPR227 Marker 74.3 Cotton - Guazuncho2xVH8-RIL - c25 JESPR227 Marker 31.85 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU133 Marker 86.2 (cM) Automated name-based View Maps
Cotton - GVc - 25 JESPR227 Marker 65.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU133 Marker 67.5 (cM) Automated name-based View Maps
Cotton - T3 - 25 JESPR227 Marker 67.2 (cM) Automated name-based View Maps
Cotton - TH - 25 JESPR227 Marker 42.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 JESPR227 Marker 78.9 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU133 Marker 69 (cM) Automated name-based View Maps
Cotton - E3 - 25 JESPR227 Marker 79.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU133 Marker 140.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR227 Marker 67.27 (cM) Automated name-based View Maps
JESPR215 Marker 75.5 Cotton - HDC - 25 CLU133 Marker 69 (cM) Automated name-based View Maps
Cotton - T3 - 25 JESPR215 Marker 67.11 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU133 Marker 140.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU133 Marker 86.2 (cM) Automated name-based View Maps
Cotton - E3 - 25 JESPR215 Marker 79.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU133 Marker 67.5 (cM) Automated name-based View Maps
CIR407 Marker 79.1 Cotton - E3 - 25 CIR407 Marker 86.9 (cM) Automated name-based View Maps
Cotton - TH - 25 CIR407 Marker 32.1 (cM) Automated name-based View Maps
Cotton - GVc - 25 CIR407 Marker 80.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR407 Marker Cotton 30,245,666 - 30,245,894 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 CIR407 Marker 103.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 CIR407 Marker 38.66 (cM) Automated name-based View Maps
Cotton - HDC - 25 CIR407 Marker 73.4 (cM) Automated name-based View Maps
BNL1153 Marker 80.1 Cotton - HDC - 25 BNL1153 Marker 79.5 (cM) Automated name-based View Maps
Cotton - PK - c6 BNL1153 Marker 49.3 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1153 Marker 88.1 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1153 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1153 Marker 69.3 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1153 Marker 74 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1153 Marker Cotton 19,375,282 - 19,375,657 (bp) Automated name-based View Maps
Cotton - HDC - 6 BNL1153 Marker 93.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1153 Marker 90 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1153 Marker 79.7 (cM) Automated name-based View Maps
CIR287 Marker 82.4 Cotton - HDC - 25 CIR287 Marker 77.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 CIR287 Marker Cotton 21,143,637 - 21,144,113 (bp) Automated name-based View Maps
Cotton - TH - 25 CIR287 Marker 49.9 (cM) Automated name-based View Maps
BNL3264 Marker 89.2 Cotton - HDC - 25 BNL3264 Marker 72 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3264 Marker 88.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3264 Marker 45.6 (cM) Automated name-based View Maps
BNL1417 Marker 93 Cotton - Guazuncho2xVH8-RIL - c25 BNL1417 Marker 44.8 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1417 Marker 46.74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1417 Marker 87.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1417 Marker 91.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1417 Marker 114.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1417 Marker Cotton 49,863,051 - 49,863,290 (bp) Automated name-based View Maps
Cotton - HDC - 25 BNL1417 Marker 64.4 (cM) Automated name-based View Maps
BNL1440 Marker 95.2 Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1440 Marker 83.8 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1440 Marker 101.4 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1440 Marker 83.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
BNL3103 Marker 99.7 Cotton - Graimondii_physical - Gr_Chr10 BNL3103 Marker Cotton 40,569,897 - 40,570,358 (bp) Automated name-based View Maps
Cotton - HDC - 25 BNL3103 Marker 70.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3103 Marker 107.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3103 Marker 83 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3103 Marker 31.5 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL3103 Marker 52.54 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL3103 Marker 88.2 (cM) Automated name-based View Maps
MUCS372 Marker 103.1 Cotton - HDC - 25 CLU1145 Marker 75.4 (cM) Automated name-based View Maps
CIR268 Marker 109.9 Cotton - HDC - 25 CIR268 Marker 60.8 (cM) Automated name-based View Maps
Cotton - T3 - 25 CIR268 Marker 43.1 (cM) Automated name-based View Maps
NAU0928 Marker 113 Cotton - HDC - 25 NAU0928 Marker 58.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU0928 Marker Cotton 54,978,186 - 54,978,850 (bp) Automated name-based View Maps
NAU0927 Marker 113.1 Cotton - HDC - 25 NAU0927 Marker 58.8 (cM) Automated name-based View Maps