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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 24
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 24
Map Start: 0 cM
Map Stop: 162.4 cM
Features by Type:
105 Marker
105 Total

Map Features

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Items 1 to 25 of 105.       of 5 | Next
Cotton - E3 - 24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MUSS250 Marker 67 Cotton - GVc - 24 MUSS250 Marker 49.7 (cM) Automated name-based View Maps
Cotton - T3 - 8 MUSS250 Marker 88.44 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU527 Marker 62.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSS250b Marker 28.36 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU527 Marker 74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 MUSS250a Marker 35.41 (cM) Automated name-based View Maps
Cotton - T3 - 24 MUSS250 Marker 73.49 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU527 Marker 65.2 (cM) Automated name-based View Maps
NAU2439 Marker 66.9 Cotton - TH - 24 NAU2439 Marker 72 (cM) Automated name-based View Maps
Cotton - T3 - 24 NAU2439 Marker 67.6 (cM) Automated name-based View Maps
Cotton - GVc - 24 NAU2439 Marker 50 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 NAU2439a Marker 35.62 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU2439 Marker 74.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 NAU2439b Marker 28.38 (cM) Automated name-based View Maps
NAU3201 Marker 65.5 Cotton - TH - 24 NAU3201 Marker 73.1 (cM) Automated name-based View Maps
Cotton - E3 - 8 NAU3201 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3201 Marker 68.7 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3201 Marker 57.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3201 Marker 70.4 (cM) Automated name-based View Maps
HAU1639 Marker 64.5 Cotton - E3 - 8 HAU1639 Marker 79.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU607 Marker 75.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU607 Marker 64.5 (cM) Automated name-based View Maps
HAU2738 Marker 63.3 Cotton - HDC - 24 HAU2738 Marker 76.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 HAU2738 Marker Cotton 53,326,435 - 53,327,671 (bp) Automated name-based View Maps
BNL1521 Marker 60.2 Cotton - CH - 24 BNL1521 Marker 80.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL1521 Marker 63.5 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL1521 Marker 74.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU12 Marker 71.6 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL1521 Marker 61.28 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL1521 Marker 45.3 (cM) Automated name-based View Maps
Gh597 Marker 57.7 Cotton - HDC - 8 CLU13 Marker 135.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU13 Marker 133 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU13 Marker 78.4 (cM) Automated name-based View Maps
Cotton - T3 - 8 Gh597 Marker 32.02 (cM) Automated name-based View Maps
NAU3721 Marker 55.5 Cotton - HDC - 24 CLU4317 Marker 75.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU4317 Marker 87.7 (cM) Automated name-based View Maps
JESPR305 Marker 54.7 Cotton - TH - 24 JESPR305 Marker 73.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 JESPR305 Marker Cotton 50,038,860 - 50,039,201 (bp) Automated name-based View Maps
Cotton - CH - 24 JESPR305 Marker 83.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 JESPR305 Marker 71.1 (cM) Automated name-based View Maps
NAU3562 Marker 53.7 Cotton - Graimondii_physical - Gr_Chr04 NAU3562 Marker Cotton 47,974,256 - 47,974,986 (bp) Automated name-based View Maps
Cotton - TH - 24 NAU3562 Marker 77.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3562 Marker 75.6 (cM) Automated name-based View Maps
BNL3638 Marker 52.9 Cotton - HDC - 24 BNL3638 Marker 80.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3638 Marker Cotton 49,554,905 - 49,555,354 (bp) Automated name-based View Maps
NAU3605 Marker 51.4 Cotton - E3 - 8 NAU3605 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3605 Marker 84.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3605 Marker 74.2 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3605 Marker 63.9 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU3605 Marker 76.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3605 Marker Cotton 48,575,980 - 48,576,787 (bp) Automated name-based View Maps
HAU3247 Marker 50.1 Cotton - Graimondii_physical - Gr_Chr04 HAU3247 Marker Cotton 47,814,002 - 47,814,763 (bp) Automated name-based View Maps
Cotton - HDC - 24 HAU3247 Marker 81.6 (cM) Automated name-based View Maps
JESPR078 Marker 49.6 Cotton - TH - 24 JESPR078 Marker 77.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 JESPR078 Marker Cotton 47,844,307 - 47,844,563 (bp) Automated name-based View Maps
Cotton - HDC - 24 JESPR078 Marker 75.1 (cM) Automated name-based View Maps
HAU3293 Marker 49.5 Cotton - HDC - 24 HAU3293 Marker 81.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 HAU3293 Marker Cotton 48,763,778 - 48,764,373 (bp) Automated name-based View Maps
NAU3499 Marker 49.3 Cotton - TH - 24 NAU3499 Marker 78 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3499 Marker 65.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU4317 Marker 75.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU4317 Marker 87.7 (cM) Automated name-based View Maps
MUCS113 Marker 49.2 Cotton - HDC - 24 CLU2762 Marker 81.8 (cM) Automated name-based View Maps
Cotton - T3 - 24 MUCS113 Marker 53.21 (cM) Automated name-based View Maps
NAU2169 Marker 49.1 Cotton - TH - 24 NAU2169 Marker 78.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU2169 Marker 76.8 (cM) Automated name-based View Maps
HAU2015 Marker 49.1 Cotton - HDC - 24 CLU1305 Marker 82 (cM) Automated name-based View Maps
BNL2616 Marker 48 Cotton - HDC - 24 CLU23 Marker 82.5 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL2616 Marker 89.1 (cM) Automated name-based View Maps
NAU3804 Marker 46.7 Cotton - HDC - 24 CLU1476 Marker 83 (cM) Automated name-based View Maps
HAU1846 Marker 46.4 Cotton - HDC - 24 HAU1846 Marker 83.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 HAU1846 Marker Cotton 46,508,724 - 46,509,435 (bp) Automated name-based View Maps
NAU2434 Marker 46.2 Cotton - HDC - 24 CLU3977 Marker 83.8 (cM) Automated name-based View Maps
NAU3071 Marker 46 Cotton - TH - 24 NAU3071 Marker 83.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU1476 Marker 83 (cM) Automated name-based View Maps
DPL0191 Marker 45.9 Cotton - T3 - 24 DPL0191 Marker 45.96 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU177 Marker 85.8 (cM) Automated name-based View Maps