CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 23
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 23
Map Start: 0 cM
Map Stop: 145.96 cM
Features by Type:
84 Marker
84 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 84.       of 4 | Next
Cotton - T3 - 23
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL2590 Marker 45.02 Cotton - Guazuncho2xVH8-RIL - c23 BNL2590u Marker 45.48 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL2590 Marker 39.1 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL2590 Marker 50.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL2590 Marker 249.7 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL2590 Marker 130.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 BNL2590 Marker 123.4 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL2590 Marker 44.11 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL2590 Marker 57.27 (cM) Automated name-based View Maps
Cotton - TH - 9 BNL2590 Marker 105.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL2590 Marker Cotton 46,355,080 - 46,355,482 (bp) Automated name-based View Maps
Cotton - HDC - 9 BNL2590 Marker 104.5 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL2590 Marker 94.5 (cM) Automated name-based View Maps
MGHES46 Marker 42.38 Cotton - T3 - 9 MGHES46 Marker 41.23 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MGHES46b Marker 60.91 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2077 Marker 123.5 (cM) Automated name-based View Maps
Cotton - GVc - 9 MGHES46 Marker 97.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 MGHES-46 Marker 259.2 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU2077 Marker 107.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 MGHES-46 Marker 184 (cM) Automated name-based View Maps
Cotton - GVc - 9 MGHES46 Marker 102.9 (cM) Automated name-based View Maps
Cotton - GVc - 23 MGHES46 Marker 109.6 (cM) Automated name-based View Maps
DPL0218 Marker 40.63 Cotton - HDC - 23 DPL0218 Marker 123.7 (cM) Automated name-based View Maps
Cotton - E3 - 23 DPL0218 Marker 116.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 DPL0218 Marker Cotton 47,417,863 - 47,418,430 (bp) Automated name-based View Maps
JESPR114 Marker 37.24 Cotton - Graimondii_physical - Gr_Chr06 JESPR114 Marker Cotton 47,717,078 - 47,717,344 (bp) Automated name-based View Maps
Cotton - GVc - 23 JESPR114 Marker 100.3 (cM) Automated name-based View Maps
Cotton - TH - 23 JESPR114 Marker 135.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 JESPR114 Marker 48.71 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR114 Marker 123.8 (cM) Automated name-based View Maps
MUSS189 Marker 34.85 Cotton - HDC - 23 MUSS189 Marker 124.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 MUSS189 Marker Cotton 47,476,253 - 47,476,774 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 MUSS189 Marker 48.71 (cM) Automated name-based View Maps
Cotton - GVc - 23 MUSS189 Marker 100.3 (cM) Automated name-based View Maps
MUCS133 Marker 33.64 Cotton - CH - 23 MUCS133 Marker 60.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2088 Marker 126.5 (cM) Automated name-based View Maps
MUSS151 Marker 31.12 Cotton - HDC - 23 CLU3269 Marker 129.7 (cM) Automated name-based View Maps
Cotton - E3 - 23 MUSS151 Marker 174.5 (cM) Automated name-based View Maps
Cotton - TH - 23 MUSS151 Marker 154.7 (cM) Automated name-based View Maps
Cotton - GVc - 23 MUSS151 Marker 107.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 MUSS151 Marker 54.06 (cM) Automated name-based View Maps
MUSS298 Marker 26.14 Cotton - E3 - 23 MUSS298 Marker 147.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2700 Marker 134.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU2700 Marker 84.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU2700 Marker 118.6 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSS298 Marker 23.99 (cM) Automated name-based View Maps
DPL0699 Marker 22.77 Cotton - Graimondii_physical - Gr_Chr06 DPL0699 Marker Cotton 49,322,898 - 49,323,548 (bp) Automated name-based View Maps
Cotton - HDC - 23 DPL0699 Marker 138.1 (cM) Automated name-based View Maps
UCcg11354_191 Marker 20.7 Cotton - HDC - 23 UCcg11354_191 Marker 140.2 (cM) Automated name-based View Maps
UCcg11354_61 Marker 20.36 Cotton - HDC - 23 UCcg11354_61 Marker 140.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 UCcg11354_61 Marker Cotton 49,677,167 - 49,677,269 (bp) Automated name-based View Maps
DPL0530 Marker 18.85 Cotton - Graimondii_physical - Gr_Chr06 DPL0530 Marker Cotton 50,050,768 - 50,051,379 (bp) Automated name-based View Maps
Cotton - HDC - 23 DPL0530 Marker 142 (cM) Automated name-based View Maps
JESPR095 Marker 18.39 Cotton - Graimondii_physical - Gr_Chr06 JESPR095 Marker Cotton 50,361,879 - 50,362,135 (bp) Automated name-based View Maps
Cotton - T3 - 9 JESPR095 Marker 15.42 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR095 Marker 122.5 (cM) Automated name-based View Maps
Cotton - CH - 9 JESPR095 Marker 3.9 (cM) Automated name-based View Maps
Cotton - TH - 9 JESPR095 Marker 133.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR095 Marker 142.5 (cM) Automated name-based View Maps
Cotton - E3 - 23 JESPR095 Marker 158.9 (cM) Automated name-based View Maps
BNL3985 Marker 14.76 Cotton - Graimondii_physical - Gr_Chr06 BNL3985 Marker Cotton 50,782,652 - 50,782,919 (bp) Automated name-based View Maps
Cotton - HDC - 23 BNL3985 Marker 146.1 (cM) Automated name-based View Maps
Cotton - E3 - 23 BNL3985 Marker 157.7 (cM) Automated name-based View Maps
NAU0864 Marker 12.58 Cotton - TH - 23 NAU0864 Marker 150.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 NAU0864 Marker 69.82 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU0864 Marker 148.3 (cM) Automated name-based View Maps
Cotton - GVc - 9 NAU0864 Marker 108.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU0864 Marker Cotton 49,089,929 - 49,090,459 (bp) Automated name-based View Maps
Cotton - HDC - 9 NAU0864 Marker 121 (cM) Automated name-based View Maps
MUCS072 Marker 11.07 Cotton - Graimondii_physical - Gr_Chr13 MUCS072 Marker Cotton 9,000,861 - 9,001,107 (bp) Automated name-based View Maps
Cotton - HDC - 23 MUCS072 Marker 149.8 (cM) Automated name-based View Maps
NAU1035 Marker 145.96 Cotton - CH - 23 NAU1035 Marker 165.5 (cM) Automated name-based View Maps
Cotton - GVc - 23 NAU1035 Marker 8.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 NAU1035 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2941 Marker 28.6 (cM) Automated name-based View Maps
BNL0686 Marker 141.35 Cotton - TH - 9 BNL0686 Marker 1.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL0686a Marker 3.29 (cM) Automated name-based View Maps
Cotton - E3 - 23 BNL0686 Marker 17.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 BNL0686 Marker 33.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL686 Marker 51.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL0686b Marker 2.64 (cM) Automated name-based View Maps
Cotton - TH - 23 BNL0686 Marker 24.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL686 Marker 5.2 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL0686 Marker 5.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL0686 Marker 26.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL686 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL0686 Marker 19.5 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL0686 Marker 178.9 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL0686 Marker 139.43 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL0686 Marker Cotton 1,175,850 - 1,176,236 (bp) Automated name-based View Maps
UCcot10422_107 Marker 140.82 Cotton - HDC - 23 UCcot10422_107 Marker 33.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 UCcot10422_107 Marker Cotton 1,232,513 - 1,232,615 (bp) Automated name-based View Maps
CIR286 Marker 140.12 Cotton - Guazuncho2xVH8-BC1 - c23 CIR286 Marker 51.3 (cM) Automated name-based View Maps
Cotton - CH - 23 CIR286 Marker 163.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 CIR286 Marker 1.7 (cM) Automated name-based View Maps
Cotton - HDC - 23 CIR286 Marker 32.9 (cM) Automated name-based View Maps
Cotton - E3 - 23 CIR286 Marker 15 (cM) Automated name-based View Maps
Cotton - TH - 23 CIR286 Marker 18.2 (cM) Automated name-based View Maps
Cotton - GVc - 23 CIR286 Marker 5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 CIR286 Marker Cotton 969,638 - 970,020 (bp) Automated name-based View Maps
MUSS300 Marker 132.25 Cotton - HDC - 23 MUSS300 Marker 42.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 MUSS300 Marker Cotton 5,322,725 - 5,323,345 (bp) Automated name-based View Maps
BNL1161 Marker 125.68 Cotton - Guazuncho2xVH8-BC2 - c10 BNL1161 Marker 75.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL1161 Marker 76.5 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL1161 Marker 84.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1161 Marker 57.55 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL1161 Marker 63 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL1161 Marker 24.6 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL1161 Marker 111.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL1161 Marker 97.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL1161b Marker 26.55 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL1161 Marker 21.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU10 Marker 76.3 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL1161 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU10 Marker 49.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL1161a Marker 11.85 (cM) Automated name-based View Maps
TMB0670 Marker 123.94 Cotton - HDC - 9 TMB0670 Marker 33.2 (cM) Automated name-based View Maps
Cotton - T3 - 9 TMB0670 Marker 128.15 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 TMB0670 Marker Cotton 6,273,098 - 6,273,668 (bp) Automated name-based View Maps
Cotton - HDC - 23 TMB0670 Marker 50.9 (cM) Automated name-based View Maps
TMB0157 Marker 123.27 Cotton - HDC - 23 TMB0157 Marker 51.6 (cM) Automated name-based View Maps
Cotton - E3 - 23 TMB0157 Marker 35.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 TMB0157 Marker Cotton 6,318,485 - 6,318,930 (bp) Automated name-based View Maps
BNL3383 Marker 120.93 Cotton - CH - 23 BNL3383 Marker 146.7 (cM) Automated name-based View Maps
Cotton - TH - 23 BNL3383 Marker 43.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 BNL3383 Marker 54 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL3383 Marker 31.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3383 Marker Cotton 7,011,652 - 7,012,195 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL3383 Marker 80.6 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL3383 Marker 26.2 (cM) Automated name-based View Maps