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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 128.91 cM
Features by Type:
86 Marker
86 Total

Map Features

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Items 1 to 25 of 86.       of 4 | Next
Cotton - T3 - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
DPL0448 Marker 87.05 Cotton - HDC - 7 DPL0448 Marker 66.8 (cM) Automated name-based View Maps
BNL1026 Marker 86.92 Cotton - HDC - 16 BNL1026 Marker 47 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1026 Marker 66.9 (cM) Automated name-based View Maps
Cotton - E3 - 7 BNL1026 Marker 82.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1026 Marker 82.92 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1026 Marker 66.4 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1026 Marker 79.4 (cM) Automated name-based View Maps
TMB0561 Marker 86.55 Cotton - HDC - 7 TMB0561 Marker 67.2 (cM) Automated name-based View Maps
JESPR228 Marker 86.06 Cotton - TH - 7 JESPR228 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR228b Marker 19.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR228 Marker 100.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 JESPR228 Marker 67.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR228 Marker Cotton 24,530,390 - 24,530,827 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR228 Marker 86.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 JESPR228a Marker 21.24 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR228 Marker 37.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR228 Marker 76.37 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR228 Marker 57.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 JESPR228 Marker 54.6 (cM) Automated name-based View Maps
BNL1694 Marker 85.88 Cotton - CH - 7 BNL1694 Marker 94.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 64.5 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 16 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 BNL1694 Marker 86.8 (cM) Automated name-based View Maps
Cotton - GVc - 7 BNL1694 Marker 36.4 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1694 Marker 75.5 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL1694 Marker 58.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1694 Marker 78.22 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1694 Marker 52.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 67.8 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1694 Marker 69.3 (cM) Automated name-based View Maps
MUSB1081 Marker 85.47 Cotton - E3 - 7 MUSB1081 Marker 96.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 MUSB1081 Marker 68.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 MUSB1081 Marker Cotton 15,073,022 - 15,074,124 (bp) Automated name-based View Maps
BNL1122 Marker 84.89 Cotton - HDC - 16 CLU8 Marker 61.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 BNL1122b Marker 14.43 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL1122 Marker 51.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1122 Marker 69.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU8 Marker 68.9 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1122 Marker 89.7 (cM) Automated name-based View Maps
Gh506 Marker 84.46 Cotton - HDC - 7 CLU188 Marker 63.8 (cM) Automated name-based View Maps
Cotton - E3 - 7 Gh506 Marker 86.5 (cM) Automated name-based View Maps
Gh146 Marker 83.85 Cotton - E3 - 24 Gh146 Marker 3.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU92 Marker 106.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU92 Marker 70.1 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU92 Marker 77.1 (cM) Automated name-based View Maps
DOW042 Marker 82.98 Cotton - HDC - 7 DOW042 Marker 70.9 (cM) Automated name-based View Maps
JESPR012 Marker 81.13 Cotton - TH - 7 JESPR012 Marker 61.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR012 Marker Cotton 20,369,107 - 20,369,363 (bp) Automated name-based View Maps
Cotton - HDC - 7 JESPR012 Marker 73 (cM) Automated name-based View Maps
TMB1561 Marker 80.58 Cotton - HDC - 7 TMB1561 Marker 73.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB1561 Marker Cotton 20,255,746 - 20,256,468 (bp) Automated name-based View Maps
TMB1844 Marker 80.15 Cotton - HDC - 7 TMB1844 Marker 74.1 (cM) Automated name-based View Maps
BNL3319 Marker 79.84 Cotton - TH - 10 BNL3319 Marker 57.7 (cM) Automated name-based View Maps
Cotton - E3 - 7 BNL3319 Marker 52.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL3319 Marker 74.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3319 Marker 70.99 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3319 Marker 60 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3319 Marker 96.6 (cM) Automated name-based View Maps
DPL0234 Marker 78.53 Cotton - HDC - 7 DPL0234 Marker 75.8 (cM) Automated name-based View Maps
DPL0292 Marker 77.01 Cotton - E3 - 7 DPL0292 Marker 62.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0292 Marker Cotton 19,019,669 - 19,020,293 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0292 Marker 77.4 (cM) Automated name-based View Maps
UCcg11001_185 Marker 75.96 Cotton - HDC - 7 UCcg11001_185 Marker 78.5 (cM) Automated name-based View Maps
DPL0751 Marker 75.02 Cotton - Graimondii_physical - Gr_Chr08 DPL0751 Marker Cotton 51,607,002 - 51,607,684 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0751 Marker 79.6 (cM) Automated name-based View Maps
UCcot10272_724 Marker 74.2 Cotton - HDC - 7 UCcot10272_724 Marker 80.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcot10272_724 Marker Cotton 18,220,960 - 18,221,062 (bp) Automated name-based View Maps
MUSS243 Marker 73.66 Cotton - HDC - 7 CLU218 Marker 81.1 (cM) Automated name-based View Maps
MUCS258 Marker 73.02 Cotton - HDC - 7 CLU218 Marker 81.1 (cM) Automated name-based View Maps
MUCS253 Marker 72.61 Cotton - Graimondii_physical - Gr_Chr12 MUCS253 Marker Cotton 29,910,412 - 29,911,686 (bp) Automated name-based View Maps
Cotton - HDC - 7 MUCS253 Marker 82.2 (cM) Automated name-based View Maps
STV023 Marker 70.79 Cotton - HDC - 7 CLU3976 Marker 84.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 STV023 Marker 62.83 (cM) Automated name-based View Maps
Cotton - E3 - 16 STV023 Marker 43 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU3976 Marker 68 (cM) Automated name-based View Maps
MUCS006 Marker 69.53 Cotton - CH - 23 MUCS006 Marker 12.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU2700 Marker 134.7 (cM) Automated name-based View Maps
Cotton - E3 - 23 MUCS006 Marker 150.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU2700 Marker 84.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU2700 Marker 118.6 (cM) Automated name-based View Maps
UCcg11026_617 Marker 68.65 Cotton - HDC - 7 UCcg11026_617 Marker 85.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg11026_617 Marker Cotton 16,148,156 - 16,148,258 (bp) Automated name-based View Maps