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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 19
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 19
Map Start: 0 cM
Map Stop: 191 cM
Features by Type:
134 Marker
134 Total

Map Features

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Items 1 to 25 of 134.       of 6 | Next
Cotton - TH - 19
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR062 Marker 91.6 Cotton - HDC - 5 CIR062 Marker 97.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR062a Marker 30.57 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR062 Marker 77.05 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR062 Marker 35.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 CIR062 Marker 114.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR062 Marker 157 (cM) Automated name-based View Maps
Cotton - HDC - 19 CIR062 Marker 96.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR062 Marker Cotton 18,241,162 - 18,241,488 (bp) Automated name-based View Maps
Cotton - GVc - 19 CIR062 Marker 97.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 CIR062b Marker 37.94 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR062 Marker 89.93 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR062 Marker 93.8 (cM) Automated name-based View Maps
NAU2932 Marker 92.1 Cotton - HDC - 22 CLU886 Marker 88.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU886 Marker 95.9 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU2932 Marker 40.1 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU2932 Marker 131.6 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU886 Marker 97.3 (cM) Automated name-based View Maps
NAU5347 Marker 92.5 Cotton - TH - 5 NAU5347 Marker 91.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU4877 Marker 98.6 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU4877 Marker 95.7 (cM) Automated name-based View Maps
BNL4078 Marker 93.4 Cotton - HDC - 19 BNL4078 Marker 95.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL4078 Marker Cotton 18,630,778 - 18,631,240 (bp) Automated name-based View Maps
GhAnn1 Marker 94.4 Cotton - HDC - 19 GhAnn1 Marker 95 (cM) Automated name-based View Maps
NAU3253 Marker 95.2 Cotton - HDC - 19 NAU3253 Marker 94.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3253 Marker Cotton 19,043,922 - 19,044,591 (bp) Automated name-based View Maps
Cotton - E3 - 19 NAU3253 Marker 127.3 (cM) Automated name-based View Maps
NAU3252 Marker 95.5 Cotton - HDC - 19 NAU3252 Marker 94.5 (cM) Automated name-based View Maps
NAU6619 Marker 95.7 Cotton - HDC - 19 NAU6619 Marker 94.5 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU6619 Marker 125 (cM) Automated name-based View Maps
GhNLP Marker 95.9 Cotton - HDC - 19 GhNLP Marker 94.4 (cM) Automated name-based View Maps
NAU6406 Marker 96.1 Cotton - E3 - 19 NAU6406 Marker 126.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 NAU6406 Marker 94.3 (cM) Automated name-based View Maps
NAU2741 Marker 96.5 Cotton - HDC - 1 CLU2615 Marker 44.7 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU2741 Marker 70 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU2741 Marker 128.8 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU2615 Marker 94.2 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU2741 Marker 83.1 (cM) Automated name-based View Maps
BNL3048 Marker 97.6 Cotton - HDC - 19 BNL3048 Marker 93.7 (cM) Automated name-based View Maps
NAU2874 Marker 99.7 Cotton - HDC - 19 NAU2874 Marker 92.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU2874 Marker Cotton 20,594,966 - 20,595,831 (bp) Automated name-based View Maps
NAU0911 Marker 101.6 Cotton - HDC - 19 NAU0911 Marker 92.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 NAU0911 Marker 42.7 (cM) Automated name-based View Maps
Cotton - GVc - 19 NAU0911 Marker 102.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU0911 Marker Cotton 21,684,438 - 21,684,862 (bp) Automated name-based View Maps
BNL3611 Marker 102.4 Cotton - T3 - 19 BNL3611 Marker 96.98 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL3611 Marker 88.6 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL3611 Marker 107.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL3611 Marker 88.4 (cM) Automated name-based View Maps
NAU3698 Marker 103.3 Cotton - HDC - 19 NAU3698 Marker 87.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU3698 Marker Cotton 22,299,383 - 22,300,273 (bp) Automated name-based View Maps
NAU2629 Marker 103.9 Cotton - Graimondii_physical - Gr_Chr09 NAU2629 Marker Cotton 22,686,757 - 22,687,445 (bp) Automated name-based View Maps
Cotton - HDC - 19 NAU2629 Marker 86.7 (cM) Automated name-based View Maps
BNL1878 Marker 104.4 Cotton - Guazuncho2xVH8-BC1 - D08 BNL1878 Marker 119.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL1878 Marker 170.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL1878 Marker 82 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL1878 Marker 64.2 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL1878 Marker 51 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL1878 Marker 112.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1878 Marker 85 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL1878 Marker 91.7 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL1878 Marker 86.5 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL1878 Marker 103 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL1878 Marker 148.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL1878a Marker 42.72 (cM) Automated name-based View Maps
TME20-195 Marker 104.9 Cotton - HDC - 19 TME20-195 Marker 85.6 (cM) Automated name-based View Maps
BNL0390 Marker 105.6 Cotton - GVc - 19 BNL0390 Marker 100.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0390 Marker Cotton 20,214,083 - 20,214,372 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL390 Marker 117.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL0390 Marker 93.6 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL0390 Marker 141.1 (cM) Automated name-based View Maps
JESPR134 Marker 106.6 Cotton - HDC - 19 JESPR134 Marker 92.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 JESPR134 Marker Cotton 20,340,834 - 20,341,247 (bp) Automated name-based View Maps
Cotton - E3 - 19 JESPR134 Marker 141.1 (cM) Automated name-based View Maps
Cotton - CH - 19 JESPR134 Marker 95.1 (cM) Automated name-based View Maps
Cotton - CH - 18 JESPR134 Marker 75.1 (cM) Automated name-based View Maps
Cotton - T3 - 19 JESPR134 Marker 93.08 (cM) Automated name-based View Maps
NAU3656 Marker 0 Cotton - HDC - 19 CLU3946 Marker 187.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU3656 Marker 9.5 (cM) Automated name-based View Maps
NAU5489 Marker 110.2 Cotton - HDC - 19 NAU5489 Marker 79.8 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU5489 Marker 155.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU5489 Marker Cotton 24,260,384 - 24,261,076 (bp) Automated name-based View Maps
NAU3609 Marker 4 Cotton - Graimondii_physical - Gr_Chr09 NAU3609 Marker Cotton 801,072 - 801,845 (bp) Automated name-based View Maps
Cotton - HDC - 19 NAU3609 Marker 183.1 (cM) Automated name-based View Maps
NAU4042 Marker 113.5 Cotton - HDC - 19 CLU3419 Marker 76.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU4042 Marker 156.9 (cM) Automated name-based View Maps