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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
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Maps 4
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 126.1 cM
Features by Type:
44 Marker
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
Cotton - TH - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU2477 Marker 83.6 Cotton - T3 - 4 NAU2477 Marker 77.6 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU2477 Marker 81.94 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2477 Marker 69.1 (cM) Automated name-based View Maps
NAU6116 Marker 89.3 Cotton - HDC - 4 NAU6116 Marker 76.6 (cM) Automated name-based View Maps
BNL4049 Marker 80.8 Cotton - TH - 22 BNL4049 Marker 79.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL4049 Marker 7.8 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL4049 Marker 69.4 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4049 Marker 27.4 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4049 Marker 72.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4049 Marker 70.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4049 Marker 24.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 BNL4049b Marker 21.09 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL4049 Marker 66 (cM) Automated name-based View Maps
Cotton - PK - c9 BNL4049 Marker 17.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4049 Marker 71.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL4049 Marker 21.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4049a Marker 27.06 (cM) Automated name-based View Maps
Cotton - CH - 4 BNL4049 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4049 Marker 12.9 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL4049 Marker 24.7 (cM) Automated name-based View Maps
EM1OD30-55 Marker 70.8 Cotton - HDC - 4 EM1OD30-55 Marker 63 (cM) Automated name-based View Maps
NAU3093 Marker 74.4 Cotton - E3 - 4 NAU3093 Marker 62.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3093 Marker Cotton 31,372,826 - 31,373,633 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3093 Marker 65.3 (cM) Automated name-based View Maps
BNL0530 Marker 68.8 Cotton - Guazuncho2xVH8-BC1 - c4 BNL530 Marker 74 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL0530 Marker 72.3 (cM) Automated name-based View Maps
Cotton - T3 - 4 BNL0530 Marker 61.45 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL0530 Marker 61.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL0530 Marker 64.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL0530 Marker Cotton 28,958,470 - 28,958,747 (bp) Automated name-based View Maps
Cotton - GVc - 4 BNL0530 Marker 30.7 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0530 Marker 50.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL530 Marker 18 (cM) Automated name-based View Maps
NAU0762 Marker 62.2 Cotton - HDC - 4 NAU0762 Marker 57.9 (cM) Automated name-based View Maps
NAU2363 Marker 66 Cotton - E3 - 4 NAU2363 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2363 Marker 65.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 60.1 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2363 Marker 63.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 37.5 (cM) Automated name-based View Maps
NAU2654 Marker 60.5 Cotton - E3 - 4 NAU2654 Marker 73.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU2654 Marker Cotton 27,666,100 - 27,666,940 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU2654 Marker 56.9 (cM) Automated name-based View Maps
BNL2962 Marker 57.5 Cotton - HDC - 4 BNL2962 Marker 55.2 (cM) Automated name-based View Maps
NAU6672 Marker 59.4 Cotton - HDC - 5 NAU6672 Marker 61.7 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU6672 Marker 135 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU6672 Marker 73.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU6672 Marker 56.3 (cM) Automated name-based View Maps
BNL1303 Marker 57.4 Cotton - HDC - 4 BNL1303 Marker 55.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL1303 Marker 92.5 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL1303 Marker 69.2 (cM) Automated name-based View Maps
NAU1158 Marker 55.8 Cotton - CH - 4 NAU1158 Marker 71.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU225 Marker 54.2 (cM) Automated name-based View Maps
NAU6626 Marker 56.3 Cotton - E3 - 4 NAU6626 Marker 127.8 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU6626 Marker 54.5 (cM) Automated name-based View Maps
BNL2939 Marker 55.5 Cotton - HDC - 4 BNL2939 Marker 54 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL2939 Marker 84.8 (cM) Automated name-based View Maps
NAU0826 Marker 54.7 Cotton - HDC - 4 NAU0826 Marker 53.5 (cM) Automated name-based View Maps
NAU1267 Marker 55 Cotton - HDC - 4 CLU3545 Marker 53.7 (cM) Automated name-based View Maps
Cotton - CH - 4 NAU1267 Marker 95.6 (cM) Automated name-based View Maps
NAU3825 Marker 54.5 Cotton - HDC - 4 CLU1338 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 52.1 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3825 Marker 81.8 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3825 Marker 83.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU1338 Marker 54.1 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU3825 Marker 56.4 (cM) Automated name-based View Maps
NAU3205 Marker 52.6 Cotton - Graimondii_physical - Gr_Chr09 NAU3205 Marker Cotton 47,321,669 - 47,322,527 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3205 Marker 52.3 (cM) Automated name-based View Maps
NAU0869 Marker 53.6 Cotton - Guazuncho2xVH8-RIL - c4 NAU0869 Marker 34.97 (cM) Automated name-based View Maps
Cotton - GVc - 4 NAU0869 Marker 47.3 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU0869 Marker 44.8 (cM) Automated name-based View Maps
Y1184 Marker 52 Cotton - HDC - 4 Y1184 Marker 52 (cM) Automated name-based View Maps
EM1OD22-80 Marker 45.9 Cotton - HDC - 4 EM1OD22-80 Marker 48.4 (cM) Automated name-based View Maps
NAU3491 Marker 47 Cotton - HDC - 4 CLU3465 Marker 49 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU3491 Marker 85.6 (cM) Automated name-based View Maps
BNL4047 Marker 44 Cotton - HDC - 4 BNL4047 Marker 47.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL4047 Marker Cotton 48,435,195 - 48,435,679 (bp) Automated name-based View Maps
Cotton - GVc - 4 BNL4047 Marker 44.8 (cM) Automated name-based View Maps
Cotton - CH - 4 BNL4047 Marker 62.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 BNL4047 Marker 39.98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL4047 Marker 109.2 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL4047 Marker 90.8 (cM) Automated name-based View Maps
NAU2363 Marker 30.9 Cotton - HDC - 4 NAU2363 Marker 60.1 (cM) Automated name-based View Maps
Cotton - E3 - 4 NAU2363 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2363 Marker 65.6 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2363 Marker 63.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 37.5 (cM) Automated name-based View Maps